| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1829 |
|---|
| Symbol | |
|---|
| ID | 3566083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 1968503 |
|---|
| End bp | 1968985 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637680300 |
|---|
| Product | putative lipoprotein involved in nitrous oxide reduction |
|---|
| Protein accession | YP_285045 |
|---|
| Protein GI | 71907458 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4314] Predicted lipoprotein involved in nitrous oxide reduction |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 56 |
|---|
| Plasmid unclonability p-value | 0.420918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0608142 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCC GCACGCTTCT CGGTCTCGGG CTGGCGCTCT GCGTCAGCCT TGCCTTTGCC
CAAAGCTCGC CCAAACCTGG CGCCAAGGAT CTATGCCCGG TCTGCGGCAT GCTGGTCTCC
AAATACCCGA ACTGGGTGGC TGTCGTAACC TGGAAGGATG GCCATGCTCA TTTTTTCGAC
GGCGCCAAGG ACATGTTCAA GTTTCTCAAT GACCTGAACA AGTTCGCCCC CGGCCACAAC
AAGGAAAACA TTACCGGCAT CTACGTCACC GATTTCTACA ACCTCGAGCG CATCGATGCG
CGCACGGCCT ATTTCGTCAG TGGCTCAGAC GTGCTCGGCC CGATGGGGCA TGAGTTTGTG
CCGCTCGCCA ACAAGGCTGA TGCGGATGAC TTCTTGAAGG ATCACAAGGG CAGGAAAATC
CTGCCCTTCG AACGGATCAC GGCCGGCATG GCGAACGGAC TGGACAGCGG TCGTTTCGAA
TAA
|
|---|
| Protein sequence | MQRRTLLGLG LALCVSLAFA QSSPKPGAKD LCPVCGMLVS KYPNWVAVVT WKDGHAHFFD
GAKDMFKFLN DLNKFAPGHN KENITGIYVT DFYNLERIDA RTAYFVSGSD VLGPMGHEFV
PLANKADADD FLKDHKGRKI LPFERITAGM ANGLDSGRFE
|
|---|
| |