Gene Daro_1524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1524 
Symbol 
ID3568629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1632642 
End bp1633184 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content57% 
IMG OID637679992 
Productcarboxymuconolactone decarboxylase 
Protein accessionYP_284743 
Protein GI71907156 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme 


Plasmid Coverage information

Num covering plasmid clones65 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGCC TCACCATTCC CCAAACCGAC CAAACCCCGT CCGCTTCCTT GCCTTTGCTC 
GAAGCCGTCA ATCGGCAACT GGGTGTCGTA CCCAACCTGA TGAAATTGGT CGGCAACAGT
CCGGCGGCAC TCGAAGGCTA CCTGAGCCTG AATGGAGCAC TGGGCAAAGG CACCATCGGC
ACCAAGACCA GCGAACGGAT CGCCCTTGCG GTAGCGGAAT TGAACGGTTG CGGCTATTGC
CTGTCGGCCC ATAGCTATCT CGGCAGCAAT CTGGCCAAGC TTGATGCATC GGAACTCGAC
GCCAATCGTC ATGGCGGCTC GAATGATCCC AAGGCTGCTG CTGCCCTTCG CTTTGCCGCG
CAGATTGTCG GGACGCGAGG ACATGTCGCG GACGCAGATC TGGTTTCAGT AAAGGCCGCC
GGCTACAGCG AGGCCGAGAT CATCGAAATC GTTCTACTGG TTGCCCTCAA CACCCTGACT
AACTATGTCA ATAACGTAGC TCAGACCGAT ATCGACTTCC CGGTAGTCAA ACCTTTCAAA
TAG
 
Protein sequence
MSRLTIPQTD QTPSASLPLL EAVNRQLGVV PNLMKLVGNS PAALEGYLSL NGALGKGTIG 
TKTSERIALA VAELNGCGYC LSAHSYLGSN LAKLDASELD ANRHGGSNDP KAAAALRFAA
QIVGTRGHVA DADLVSVKAA GYSEAEIIEI VLLVALNTLT NYVNNVAQTD IDFPVVKPFK