Gene Daro_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1390 
Symbol 
ID3566118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1520203 
End bp1521117 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content63% 
IMG OID637679858 
ProductPirin, N-terminal:Pirin, C-terminal 
Protein accessionYP_284609 
Protein GI71907022 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.0000265912 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.285485 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTT CCACCCTGCC CCCATTGGAG AAAATCATGA ACACAGCCAT ATCCAGCCAT 
CAATTCAGAA CGGTTGAGCG CCTCGTTGCC GGTGTTCAGA CCTCCGACGG CGCCGGCGTG
CGCCTGACCC GGGTGCTGAC CCAGAACCTG CAACGTCGCC TCGACCCCTT CCTGATGCTC
GACGCCTTCC GCAACGAGAA TCCGGACGAC TACATCGGCG GCTTCCCTGA TCATCCGCAT
CGCGGCTTCG AAACGGTCAC CTACATGATC GCCGGCCGGA TGCGGCACCA CGACAGCGTC
GGCAACGAAG GCCTGCTCGG GCCGGGCGGC GCCCAATGGA TGACGACGGG CAGCGGGCTG
ATCCATTCCG AACTGCCGGA ACAGGAAGAA GGCCTGATGG AAGGTTTCCA GCTCTGGCTC
AACCTGCCGG CCAGCCAGAA GATGGTTGCC CCGAGCTATC GCGACATCCC GCCGGCCGCC
ATTCCGGAAT ATGCCGACGA GAATGGCATT GTCGTCCGTG TCATTGCCGG GGCCAGCCAC
GGCATCAACG GGGCCGTCCA CCGTCCGGAC ACCGAGCCGC TCTATCTCGA CGTGCATCTG
CCGGCGGGTA CGAGTTTCGA GCAGCCGATC ACCGCCGGTC ACAATGCCTT TACCTACACC
TATCGTGGCA GCGTGAGCAT TGCCGGCACG ACGGTCGCCG ACCGGCACAT GGCCATCCTG
ACCAACAACG GCGCACCGGC CGTCTGCATC GAAGCGCTTG AGGCGTCGCG CGTGCTGATC
ATTACCGGAC AACCGCTCAA TGAGCCGATC GCGCAGTACG GCCCGTTCGT GATGAACACC
GCCGAGCAGG TTCATCAGGC CATGCGCGAT TACCAGTCTG GCAAGTTCGA GGCGACGGTG
GTTCAATCGC TGTGA
 
Protein sequence
MSASTLPPLE KIMNTAISSH QFRTVERLVA GVQTSDGAGV RLTRVLTQNL QRRLDPFLML 
DAFRNENPDD YIGGFPDHPH RGFETVTYMI AGRMRHHDSV GNEGLLGPGG AQWMTTGSGL
IHSELPEQEE GLMEGFQLWL NLPASQKMVA PSYRDIPPAA IPEYADENGI VVRVIAGASH
GINGAVHRPD TEPLYLDVHL PAGTSFEQPI TAGHNAFTYT YRGSVSIAGT TVADRHMAIL
TNNGAPAVCI EALEASRVLI ITGQPLNEPI AQYGPFVMNT AEQVHQAMRD YQSGKFEATV
VQSL