Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1165 |
Symbol | |
ID | 3569291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 1269411 |
End bp | 1270799 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637679632 |
Product | Outer membrane efflux protein |
Protein accession | YP_284391 |
Protein GI | 71906804 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATTTT TACCTTGCTT TTTCCTGTTG AGCGCCAGCT GTCTGTCAGC ATGGGCCGGC GGGCTCAATG ATCCGTTCGC TACCGATGCC ATGGTGCCGC TCAAGCCATC GCCAGCGTTG TCGGCTCGGG TCGGCGAGGC GGCGTGCGCA ACGGCATTGC CGGCCGGTGC GCTGACGGCC GTCGATGCCG TCGATCTGGC CCTGTGCAAT CACCCGCAGA CGCGGGAAGT CTGGGCTGCT GCCCGGGCGC AGGCGGCACT GCTTGGCGTG GCGAAGGCGG GTTGGTTGCC GACGCTCACC GGGACTGCGG GTTCAACCCG TTTCGAATAT GAAAACAGCG CCTATACCCG GAATACGGCG GCGCTGACCC TCTCCTGGCT GCTCTATGAT TTCGGCCAGC GTTCAGCCAA TGTCGAGAAT GCACAGCAAC TGTTGAACGC CGCTGCGGCC ACTCAGGATG CGACCGTGCA GAGCTTGTTC CTGGCCGCAT TGCAGGGCTA TTACTCGGCG CAGGCGACGC AGGCGGCGGT GGTTTCTGCC CTTGAGGCCG AGCGTTCGGC GCGCGAGAGC TATCAGGCGG CCGATGCTCG CTATGGTGTT GGCGTGGCGA CGCCGGCTGA CCGTTTGCAG GCGCAGACGG CTTTTTCACA GGCCACGCTG AACCGTATTC GGGCCGAAGG GGATGCCCGC AATGCCTTGG GCACGCTGGC CAATGCGCTG GGTTTTGAGG CGCAGCTAAG GATCGTCCTG GCAGAATTGC CGGCGGCGCC AACCGGGGTG GTTTTTCAGA AGGAAGTTGA TGCGCTGATT GCCGAGGCCC AGACGCGGCG ACCGGACTTG CGGGCCGCCG AGGCCCAGCT CAAGGCTGCC GAGGCCAGTA TCGATCTGGC CCGCGCCCAG GGGCGGCCGA CCATTTCGCT GGGGGCAGGG CCAAGCTGGC AGGATTCGGC TGGCGTGATC ACGCAGGGCG GCAGCGTCGG GCTGACCTTG AGCGTTCCGA TCTTTTCCGG CTTCGATACC ACCTATCGGG TGCGCTCGGC GTCGGCGCAG GCCGATGTCC GGACCGCCCA GCGCGACCGG ATCCGGAACC AGATCGCGCT TGACGTCTGG AAGGCCTACC AAAGCCTGAC GACCGCAACC CAAAGCCTGA AGACGACGGC TGACCTGGTG GCCAGTGCCG AGCAGTCGGC GCAGGTTGCG CTCGGCCGCT ACAAGGCCGG TGTCGGCACG GTACTCGACT TGCTGTCGGC GCAAAGTGCG CTGGCCAGTG CACGTCTGCA GCGCATCCAG GCACAACTGG ACTGGAATGT TTATCGCGCC ACGCTGGCCC AGGCCATGGG CGCACTTGAT TACACGCTGC TGCAACCGGC AGCGGAAGGA AGACCATGA
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Protein sequence | MRFLPCFFLL SASCLSAWAG GLNDPFATDA MVPLKPSPAL SARVGEAACA TALPAGALTA VDAVDLALCN HPQTREVWAA ARAQAALLGV AKAGWLPTLT GTAGSTRFEY ENSAYTRNTA ALTLSWLLYD FGQRSANVEN AQQLLNAAAA TQDATVQSLF LAALQGYYSA QATQAAVVSA LEAERSARES YQAADARYGV GVATPADRLQ AQTAFSQATL NRIRAEGDAR NALGTLANAL GFEAQLRIVL AELPAAPTGV VFQKEVDALI AEAQTRRPDL RAAEAQLKAA EASIDLARAQ GRPTISLGAG PSWQDSAGVI TQGGSVGLTL SVPIFSGFDT TYRVRSASAQ ADVRTAQRDR IRNQIALDVW KAYQSLTTAT QSLKTTADLV ASAEQSAQVA LGRYKAGVGT VLDLLSAQSA LASARLQRIQ AQLDWNVYRA TLAQAMGALD YTLLQPAAEG RP
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