Gene Daro_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1029 
Symbol 
ID3568110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1129889 
End bp1131277 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content67% 
IMG OID637679488 
Productsignal transduction histidine kinase, glucose-6-phosphate specific 
Protein accessionYP_284255 
Protein GI71906668 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCTG GCTTGGGTCG CCGCAATCAT CGGCTGACCC TGCGTACCCG CGTCGGCCTC 
GTCCTGACCG GCCTGGCTGC CAGCCTGTTG CTGGTGCTCG GCGGCCTGTG GCTGCACGGC
ACGCGCAATT CGATCCACGA AGAAGTCGAG GCGGCCAGCC GGGTGTCGGA ACAATGGCTG
AAAGTCGTCG TTGGCGATCT GCACGCCTTG CCGGCCAGCC AGCGCTCGGA ACGACTGCTT
GGCGTGGCGC GCGCCATCGG CCGGATTCGC GCCAACGAGC TGGAAGTCCA TAGCCCGGAT
GGCAGCTTGC TCTATGTTTC TCCGGCACCG ACTTACAAGG CCGGTCGCGC TGCTCCGGCT
TGGTTCGCTC GCCTTCTCTC TGCCGATCTG CCGGTGCGTA CCATGAGTGT TGGCGAGTTC
CGGCTCAGCT TGCGCCCCGA CGACTCACGC GCCGTGCTCG ATGCCTGGGA TGAATTGCTG
GCGCTGGCCG GCTGGGCGCT GGCGCTGCTC GTTTGCCTGT TCGTCGCCGC CTGCGGTGCG
CTGGCCCGGG CTTTGCGGCC GCTCGATCAG ATCATGCGGG CACTGGACCG GACTGGCCGC
GGCCGTTTCG ACACACGCCT GCCGCAATTC GCCACCCCGG AACTCGGCCG CATCTCCCGC
GCCTTCAATG GCATGGCCGA CCGCCTGAGC GCGGCGGTCG ACGAGAATGT CAGGCTCGAT
ACCGAGCGCG AAGTCGCCGA GCGCATGCAA GCCGGGCTGC AGGCCGAACG GCAGGTGATC
GCCCGCGAAC TGCATGACGA GCTGGCCCAG GGCATTACCG CCGTTCGCGC GCTGGCCGGG
GCGATTGTCC AGCGCACGCC GGATGAGCCG GCGCTGCATA TTCCGGCGCA GAGCATCGTC
GCCGTGACCG GCGAGATGCA GGACGGCGTG CGCAATATCC TGCATCGCCT GCGGCCACCG
GTGGGCAGTT CGCTGGTGGT CGCGCTCGAT CGTCACCTCG GCAACTGGCG CCTGCAGCAT
CCCGATGTTG AATTGCTCAG CCATCTGGCG ATCGTCGACC GGCCAGTCGC CGACGATCTG
GCGGCCACCG TGCTGCGCTG CGTGCAGGAA GGGCTGACCA ATGTCGTTCG CCATGCCGCC
GCCAGCCGGG TCGAACTGCG TCTGTTCCGC GAGGCCGGCT GGCTGCATCT GTCGCTGGCC
GATAACGGCC GAGGTCAGGT CGAAAAATCA ACCAACGCCG GCTGCGGACT CGGGCTGACC
GGCATGGCGG AGCGCATCTC CGCCATTGGC GGGCATCTCC GCTTGTCCAG CCCGCTCGGC
CAGGGCTTTT GCATTGATGT CCGCCTGCCG GACGTTCATA TCCATCATCT TCAGGAGGAA
TTCGCATGA
 
Protein sequence
MASGLGRRNH RLTLRTRVGL VLTGLAASLL LVLGGLWLHG TRNSIHEEVE AASRVSEQWL 
KVVVGDLHAL PASQRSERLL GVARAIGRIR ANELEVHSPD GSLLYVSPAP TYKAGRAAPA
WFARLLSADL PVRTMSVGEF RLSLRPDDSR AVLDAWDELL ALAGWALALL VCLFVAACGA
LARALRPLDQ IMRALDRTGR GRFDTRLPQF ATPELGRISR AFNGMADRLS AAVDENVRLD
TEREVAERMQ AGLQAERQVI ARELHDELAQ GITAVRALAG AIVQRTPDEP ALHIPAQSIV
AVTGEMQDGV RNILHRLRPP VGSSLVVALD RHLGNWRLQH PDVELLSHLA IVDRPVADDL
AATVLRCVQE GLTNVVRHAA ASRVELRLFR EAGWLHLSLA DNGRGQVEKS TNAGCGLGLT
GMAERISAIG GHLRLSSPLG QGFCIDVRLP DVHIHHLQEE FA