| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1010 |
|---|
| Symbol | |
|---|
| ID | 3568435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 1104707 |
|---|
| End bp | 1106500 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637679469 |
|---|
| Product | immunoglobulin-like |
|---|
| Protein accession | YP_284236 |
|---|
| Protein GI | 71906649 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[Z] Cytoskeleton |
|---|
| COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAGCC AACCACGCGC TGGCCGAAGT CTGTTCGCAC TGTCAGCCAT TGCCCTGTTC
TCTGCGGCGG CTATCGGTGC CACGCCGCAG GTTGCCATGG CGCCGGAACA CACCGTGTTG
CTCAAGGCTG ACGGTACGGT CTGGCACTGG GGCGTTGTCG ACTTTGTCGG AGCCAGAAGT
TCGCCGGGCA GTAGTTGCTA TGCCGTGGAT TCGTCCAAGG CCGCGCCGGC TCAGGTCAGT
GGTCTGAGCG GCATCATTGC CGTGGCAGCG ACCGGCAGGG AAAGCATTGC CCTGAAGAGT
GACGGAACGG TCTGGCAGTG GGGCTTGAAT TCAGCCTTGC TCGCCACTTG CCCTGCCGGT
TCCATTGCCA GTGCGCCGAC GAAAGTGGCT GATGCGAACG GCCCCTTGGC CTATATCACC
GCCATCTGGG CGCGGTCGGG CAGTTTCTTT GCCCGCAAGT CCGATGGCTC GCTGTGGGCC
TGGGGCAACA ACGAGATGAA CAAGCTGGGA ACCGATGGCA CCGTGCAGGC GACCAGCACG
CCCAAGCCGG GGCCGACTGT ACAGAACATT GCCGTGCCGC TGCAGGTCGA TCATCTGAAG
GCTGCCGCCG GTGCCTGGCC ACCAGCCACG CCGCCGCTGG CGATGACTTC GGGTGATACG
CATACACTGG CTCTTTTCTA TGACGGCAAT ATCAAGGCTT GGGGGGGCGG CGAATACGGT
GAGCGTGGCA CCGGCGCCTA TGGCAAGGGC GCCAATCCGT ATTGGAACGG ATGGTTCTGG
AAGGATTGGC CGGCGATGAC GGCGATCAAT GGCGTCTCCG GTCTGGCTGC CGGTTTATAC
AAGTCGGCGG CAGTCAAGAA CGATGGCAGC CTGTGGGTCT GGGGGTGCAA CCAGGCGGGC
GAGCTGGGTG AAGGCATTCC GGTAGGCTCG CACGTCAGCG TTCTTTGCGA GCGACTGCCC
AAACAGGTGG GCAATCTGAG CGGGGTCGCC GCTGTGGCCA TGGGTGAAAG CCATACGACC
ATCCTCAAGT CCGATGGCAC GGTCTGGGGC ATGGGCTTCA ACGGCAGTGG CGCCCTGGCG
GCTGACAACA GTGTGATACG CAGCCTCGTG CCACTCCAGA TTGCCGGCCT GAGCGGTATC
ACGGCGATTG ATGCAGCCAA GTCGTGCTCG GTGGCGATCA AGAATGACGG CACGGTCTGG
GAGTGGGGGG GCGATTGCAA CAGCCCGAAA TACCGTACGG TGCCGCCCGA ACAGATCAAT
GTCGGCAGCG TGGCGACAGG ACCGGTCTGC GGCAGTGCCA GTGGGCGCTC CTTTGCCGCG
GCCCCCGCCG CCAACCTGTG TCTCGTCGGT TCTGCATCGG CGGTCACGGG CAGCGGTCCG
TGGAGCTGGA CCTGCGGGCC GTTCAATGGC CAAAGCGCCA GTTGCGCAGC AGGTAATGGC
CCGGTCTTCG TGCTCAATCC GGCGAGCCTC AGGGTCTTCC CGGGGCGGAC GATTACCCTG
AGGGCAATCG CCCAGGGCAA TGGCACGCTG GCTTATCAGT GGTACAAAAT GCCGGTTACT
GGCGGCAAGG TACAGGTGAC CGACCGTCGG GGTATGGCCA GCCAGTTCGG TGTGCGCTCC
GGTATCGCCG GATCGGCTAC GGCGCAGCTG ACGATCAGCA ATATCCAGGC CGCTGATGGT
GCATCGTACT TCGTCGAAGC CAAGGACCAG AATGGTGTGT CGGCTCAGAG CCAGCTCGCG
CAAGTCGGCG TGATGATGGC GACCAAACCT ACACGGCCCG AACCCATTCG CTGA
|
|---|
| Protein sequence | MSSQPRAGRS LFALSAIALF SAAAIGATPQ VAMAPEHTVL LKADGTVWHW GVVDFVGARS
SPGSSCYAVD SSKAAPAQVS GLSGIIAVAA TGRESIALKS DGTVWQWGLN SALLATCPAG
SIASAPTKVA DANGPLAYIT AIWARSGSFF ARKSDGSLWA WGNNEMNKLG TDGTVQATST
PKPGPTVQNI AVPLQVDHLK AAAGAWPPAT PPLAMTSGDT HTLALFYDGN IKAWGGGEYG
ERGTGAYGKG ANPYWNGWFW KDWPAMTAIN GVSGLAAGLY KSAAVKNDGS LWVWGCNQAG
ELGEGIPVGS HVSVLCERLP KQVGNLSGVA AVAMGESHTT ILKSDGTVWG MGFNGSGALA
ADNSVIRSLV PLQIAGLSGI TAIDAAKSCS VAIKNDGTVW EWGGDCNSPK YRTVPPEQIN
VGSVATGPVC GSASGRSFAA APAANLCLVG SASAVTGSGP WSWTCGPFNG QSASCAAGNG
PVFVLNPASL RVFPGRTITL RAIAQGNGTL AYQWYKMPVT GGKVQVTDRR GMASQFGVRS
GIAGSATAQL TISNIQAADG ASYFVEAKDQ NGVSAQSQLA QVGVMMATKP TRPEPIR
|
|---|
| |