| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0549 |
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| Symbol | |
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| ID | 3570062 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 608801 |
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| End bp | 610126 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637678992 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_283776 |
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| Protein GI | 71906189 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.973361 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGCCA AGATCAAGGC GGGGCTACTC TCGCTTCGGG ATTTGTTCGC CACGGCGTGG
TGGATCATCC TTCTGGCGGC CATCGGTTTT GCGATCGCCT ACCAGTTTGT CGAGCCGGCG
CCGCCGAAAA AAATCGTCAT CACGACCGGC GGCGAGAGCG GTGCTTATTA CCAGTTTGCC
CAGCGTTACG CGACGATTCT GGCCAAGGAT GGCGTCACGC TTGAGGTCAA GGCTTCGGCC
GGTTCGCTGG AGAACATCGA GCGACTGAAG AACGGCGAGG CGCAGATTGC TTTTGTCCAG
GGGGGCGTCG TGCCGCCCAA GGAAGACCCG GATGCCGAGG ACGATTCCGG CTTGCTGTCG
CTGGGCAGCC TGTTTTATGA GCCGGTCTGG GTGTTCTATC GCAGTGACAA GGAACTGACG
CGGCTGACCG AGTTGCGCGG CAAACGGATT GCCATTGGCC AGGAAGGTTC CGGGGTGCGC
CAGCTGGCGC AGCAACTGTT GAAGGCCAAC GACATACCGG CCGGCGATCA TCTGGTGCCA
CTGTCCGGCC TGAACGCGGC CGAAGAGTTG CAGCAGGGAC GGATCGACGC GGCTTTCATC
ATCGCTGCCG AGAATGCCCC GGTGGTTCAG GTCTTGTTAC GCTCGCCGGG GATCAAGCTG
ATGAGCTTTT CCCAGGCCGG GGCCTATCAG CGCCGTTTCC CCTTCCTGAC CAAACTGACT
TTTCCGCACG GCGTAGCCGA TCTGGTGCGC GATTTCCCGC CGGATGACAT CAAGGTGCTG
GCCCCGACGG CCAACCTGAT CATCCGCGAT GACCTGCATC CGGCTTTGCA GACCTTGTTG
CTGCATGCCG CCAGCGATGT GCATGGCAAG TCCGGCTTCT TCCAGGATGC CGGCGAGTTT
CCGTCCTACA AGGACCAGAT GCTGCCGCTG TCGCCTGATG CGGCGCGCTA TTTCAAGTCC
GGACCGCCCT TCTTGCAACG TTACCTGCCG TTCTGGCTGG CCGTGCTGGT CGACCGGCTG
ATCGTCATGC TGGTGCCGAT TTTTGCGTTG TTGATACCGC TGCTCAAGGT GGCGCCGGCC
ATCTACACCT GGCGGATTCG GCGCAAGGTC TTCCTCTGCT ACGGCGAGTT GAAGTTCCTG
GAGGAGGATT TGACGCATCA TTTCGACCCG GCGAAACTGA CACACTACCG CGATCGGCTG
GATGCGCTCG ATATCGAGGC CAGTCAGCTG CATGTGCCGC TCGGCTTCAC CGATCTGGTC
TATACCCTGC GCGAACACGT CAATCTGGTG CGCAGCATCC TCGATAAACG GGAAAAACAA
GCATGA
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| Protein sequence | MMAKIKAGLL SLRDLFATAW WIILLAAIGF AIAYQFVEPA PPKKIVITTG GESGAYYQFA
QRYATILAKD GVTLEVKASA GSLENIERLK NGEAQIAFVQ GGVVPPKEDP DAEDDSGLLS
LGSLFYEPVW VFYRSDKELT RLTELRGKRI AIGQEGSGVR QLAQQLLKAN DIPAGDHLVP
LSGLNAAEEL QQGRIDAAFI IAAENAPVVQ VLLRSPGIKL MSFSQAGAYQ RRFPFLTKLT
FPHGVADLVR DFPPDDIKVL APTANLIIRD DLHPALQTLL LHAASDVHGK SGFFQDAGEF
PSYKDQMLPL SPDAARYFKS GPPFLQRYLP FWLAVLVDRL IVMLVPIFAL LIPLLKVAPA
IYTWRIRRKV FLCYGELKFL EEDLTHHFDP AKLTHYRDRL DALDIEASQL HVPLGFTDLV
YTLREHVNLV RSILDKREKQ A
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