Gene Daro_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0114 
Symbol 
ID3569959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp131425 
End bp131946 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content63% 
IMG OID637678549 
Productrod shape-determining protein MreD 
Protein accessionYP_283343 
Protein GI71905756 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2891] Cell shape-determining protein 
TIGRFAM ID[TIGR03426] rod shape-determining protein MreD 


Plasmid Coverage information

Num covering plasmid clones82 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCAA CCTTTTCCTC ATCCCGCATT CTGTTGCCGG TCCGGCCTTG GTTCATATTC 
TTCAGCCTGA TCGCCGCCGC GCTCCTCAAC TTCCTGCCAA CGGCACACTG GCCAGGGATG
CCGGACTGGA TTGCACTGGT CCTGTGTTTC TGGAGCGTTC GAGAGTTCCG CAAGGTCGGC
ATGGGCTGGG GCTTCGCACT CGGTCTGCTG ATGGATGTCG CCGATGGCGC GGTGCTTGGC
CAGCATTGCT TCGCCTACGT GATACTGGCC TACACCGCGG CCTCGCTGTC ACGGCGCATC
CTCTGGTTCC CGCTCGTCCA GCAGGCCCTG CAAATCATGC CGCTCTTACT CGCGGCGCAG
GTATTGCAGG CCTTGATGCG CCTTGCCGTG GGCGCCGACT TCCCCGGCTG GGGCTATTTC
GTGGGCCCGT TGATCGCTAC GCTGCTCTGG ATTCCCGCCA CCTTCATCCT GCTCCTGCCG
CAGTACCGGC CGGTCGAGCA AGACCCCAAC CGCCCGATTT GA
 
Protein sequence
MQPTFSSSRI LLPVRPWFIF FSLIAAALLN FLPTAHWPGM PDWIALVLCF WSVREFRKVG 
MGWGFALGLL MDVADGAVLG QHCFAYVILA YTAASLSRRI LWFPLVQQAL QIMPLLLAAQ
VLQALMRLAV GADFPGWGYF VGPLIATLLW IPATFILLLP QYRPVEQDPN RPI