Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0074 |
Symbol | |
ID | 3569713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 88541 |
End bp | 92146 |
Gene Length | 3606 bp |
Protein Length | 1201 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637678509 |
Product | allophanate hydrolase subunit 2 |
Protein accession | YP_283303 |
Protein GI | 71905716 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG1038] Pyruvate carboxylase [COG1984] Allophanate hydrolase subunit 2 [COG2049] Allophanate hydrolase subunit 1 [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain [TIGR02712] urea carboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.755435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAGCA AAGTCCTTAT CGCCAATCGT GGCGCCATCG CCTGCCGGAT CATCCGTACC CTGAAAAAGC TGGGGATTGC CTCGGTCGCG GTCTATTCCG AGGCTGATGC CAATTCCTTG CATGTCACGC TGGCCGACGA GTCCGTATGT ATCGGCCCGG CTCCGGCCGC GGAGAGCTAC CTGAAGGCTG AGCGGATTCT TGAGGCAGCG CAGCAGACCG GGGCTCAGGC GATCCACCCT GGCTACGGCT TCCTGTCGGA GAACCCCGAT TTTTCGGATG CCTGCGAGGC TGCCGGCATC GCTTTCATTG GCCCGACCAA GGCGCAGATG CTGGCTTTCG GCCTCAAGCA CACGGCACGC GAACTGGCCG AGGCGGCTGG CGTTCCGCTG CTGCCGGGCA GCGGCCTGCT GAGCGATGTC GGCCACGCCC GCGGCGAGGC GGCGCGCATT GGCTATCCGG TGATGCTGAA GAGTACGGCG GGCGGCGGCG GGATCGGCAT GCGCCTGATC TGGGCCGAGG ATGAACTGGC CGAAGCCTTC GCCTCGGTTG ACCGGCTGGC CCGGGCAAAT TTCAAGGAAG CCGGCATCTA TCTCGAAAAA TATGTCGAAT CGGCGCGGCA CATCGAAGTG CAAGTGTTCG GCGACGGGGT GGGCAAGGTG CTCGCCCTCG GCGAGCGGGA TTGTTCGGTG CAGCGCCGTA ACCAGAAGGT GATCGAGGAA ACGCCGGCTC CCGGCCTGAA CGATGCCCAG CGCCAGGGTC TGGCCGAAAC GGCGGTACGC CTGATGGCTT CGGTGTCCTA CCGCTCGGCC GGGACGGTCG AGTTCGTGAT GGATGCGGCG ACCGGCGCCT TCTACTTCCT CGAGGTCAAT ACCCGCCTGC AGGTCGAACA CGGCGTGACC GAAGAGGTGA CCGGCGTCGA TCTCGTTGCC TGGATGGTGC TGCTCGCGTC CGGTGACCTG CGATTGCCGG CCACGGCACC GAGGCCGCGG GGTGCGTCGA TCCAGGTGCG CCTCTATGCC GAAGATCCGA ACAAGAATTT CCAGCCTTCC TCCGGCCTGC TGACCGAGGT CACTTTTCCC GAGGGCGTGC GGGTCGAGAC GGCGGTCAAG ACCGGCTCCG AGGTGCCGCC GTATTACGAC CCGATGGTCG CCAAGCTGAT TGTTCATGCC GAAAGCCGCG AGGCTGCTGT CGACAAGCTG GCGGCAGCGC TGGCCGCGAC GCGAGTCGCC GGCATCGAGA CCAATCGCGA GTACCTGCGC CAGATTCTGG CCGGCAGTGT TTTCCGTGCC GGAGAACAGA CGACGCGCTA CCTCAATGCC TTCCATTACC AGCCGGCGAG CATCGATGTT CTGGAGCCCG GCGTCCAGAC CTCGGTACAG GACTGGCCGG GTCGAGTCGG CTACTGGGAT GTCGGCGTGC CGCCCTCAGG GCCGATGGAT GACCTGGCCT TGCGGGCGGC CAACCGGCTG GTTGGGAATC CGGAGGGCAT GGCCGGTCTG GAATGCACTA TGACCGGCCC GACGCTCAAG TTCAATTGCC CGGTGGTGAT TGCCCTGAGC GGGGCCGAAA CTGCCGCGAC CCTCGATGGC GAGCCGCTGG CCTTCTGGCA GGCGCATGCC GTCAAGGCCG GCAGTATCCT CAAGGTCGGC GCCATCCGCG ATGCCGGTTG CCGCAGTTAT CTGGCGGTGG CGGGCGGTAT CGACGTTCCC GACTATCTGG GCAGCAAATC CACCTTTACG CTAGGCCAGT TTGGCGGCCA CGGCGGACGC ACGCTGCGGC TGGGCGATGT GCTGCACATC GAGGCGACAG AAACCTTGCC GATGGTCGAG CTGCCGGCCG AAATGGCGCC GGTCTATGAG CATCATTGGG AAATCGGGGT GCTCTACGGC CCGCACGGGG CACCGGATTT CTTCACCGAT GGCGATATCG GAACCTTCTT CGCGACTGAC TGGGAGGTGC ATTACAACTC CAGCCGCACC GGCGTCCGGC TGATCGGTCC GAAACCGGCG TGGGCAAGGA CTGACGGCGG CGAGGCCGGG CTGCATCCAT CGAACATTCA CGACAACGCC TACGCCATTG GTGCCATCGA TTTCACCGGC GACATGCCGG TCATTCTCGG GCCGGATGGC CCCAGCCTCG GCGGCTTTGT CTGCCCGGCC GTGGTGGTTC AGGCGGAATT GTGGAAGCTC GGCCAGCTGC GGCCGGGCGA TACGGTGCGT TTCCTGCCGA TCAGTGCGGC CAGTGCTGCA TGTCGTCTGA GCGAAGTCGA TCAGGCCGTG GCCAGCCTGG CTGCGCCTTT GACGACGCGC TTGCCAAGCG CCGTGGCGGA GCTCGGCACG CCTGTCCTGG CCGAGTTGCC GGCGCTTGGC GACCGGCCGC GCGTGGTTTA CCGTCAGGCC GGCGATGCCT ATCTGCTGGT TGAGTACGGT CCGCTGGTGC TCGACATCGA GTTGCGCTTC CGGGTTCAGG CCCTGATGGA CTGGCTGAAG GCCAATCCGC AGCCGGGCAT CCTCGACCTG ACACCTGGTA TCCGCTCGCT GCAGGTGCAT TTCGATGCCC GTCGTTGTGA TCGGGCTGTG CTGCTTGCCA TGCTGCTGGC GGCAGAACAG GCGCTGCCGG CGGTGGACGA CATGGTCGTA CCGAGCCGGA CGGTGTGGCT GCCCCTGTCC TGGGACGACC CGGCGACCAA GCTGGCGATC GAAAAATACA TGCAGTCGGT GCGCAAGGAT GCGCCGTGGT GTCCCTCGAA CATCGAATTT ATCCGCCGTA TCAATGGTCT CGAGTCGATC GAGCAGGTCT ATGCTACGGT CTTCGAGGCC AGCTATCTGG TGCTCGGCCT TGGTGACGTT TACCTTGGTG CGCCGGTGGC GACGCCGGTC GATCCCCGGC ATCGCCTGGT GACGACCAAG TACAACCCGG CCCGGACGTG GACGCCGGAA AACGCCGTCG GCATCGGTGG CGCCTACATG TGCGTCTATG GCATGGAAGG GCCCGGCGGC TACCAGTTCG TCGGCCGTAC GGTACAGATG TGGAATCGCT GGAACCATGG GGCGCGGGGT ACGGCGCAGT TCGCCCAGCC CTGGCTGCTG CGCTTCTTCG ACCAGGTACG CTTCACGCCG GTCAGCGAAC AGGAACTGGT GCGCTGGCGC CAGGACTTTC TGGCCGGCCG GGCCAGTGTT CGCATCGAGG AAGGCAGCTT CCGGTTGTCC GACTACCGTC AATTCCTGAC CGATAACGCA GCTTCCATCG GCGATTTCAA AGCCCGGCAG CAGGCGGCTT TCGAGGCCGA GCGTGAGCGC TGGAAAGAGG CAGGGCAAGC GGAATACATC AGCGAGAGCG ACATTGCTGC CGCCGGCACC GACAGCGAGC TCGACCTGCC TGAGGGCGCC AGCCTGGTGG TGAACCATGT TCCCGGCAAT GTCTGGAAGA TCCTGGTGAC GCCCGGCCAG AGGGTCAAGG CGGGCGAACC GCTGGTCATT GTCGAGTCGA TGAAGATGGA ATTCACTGTC CCCGCCCCGG AGGACGGTGA AGTCCTGCAA CTGCTTTGCC AGGAGGCCAG CCCGGTTGCC GCCGGTCAGG ATCTGCTGGT TCTCAAGACC ACCTGA
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Protein sequence | MFSKVLIANR GAIACRIIRT LKKLGIASVA VYSEADANSL HVTLADESVC IGPAPAAESY LKAERILEAA QQTGAQAIHP GYGFLSENPD FSDACEAAGI AFIGPTKAQM LAFGLKHTAR ELAEAAGVPL LPGSGLLSDV GHARGEAARI GYPVMLKSTA GGGGIGMRLI WAEDELAEAF ASVDRLARAN FKEAGIYLEK YVESARHIEV QVFGDGVGKV LALGERDCSV QRRNQKVIEE TPAPGLNDAQ RQGLAETAVR LMASVSYRSA GTVEFVMDAA TGAFYFLEVN TRLQVEHGVT EEVTGVDLVA WMVLLASGDL RLPATAPRPR GASIQVRLYA EDPNKNFQPS SGLLTEVTFP EGVRVETAVK TGSEVPPYYD PMVAKLIVHA ESREAAVDKL AAALAATRVA GIETNREYLR QILAGSVFRA GEQTTRYLNA FHYQPASIDV LEPGVQTSVQ DWPGRVGYWD VGVPPSGPMD DLALRAANRL VGNPEGMAGL ECTMTGPTLK FNCPVVIALS GAETAATLDG EPLAFWQAHA VKAGSILKVG AIRDAGCRSY LAVAGGIDVP DYLGSKSTFT LGQFGGHGGR TLRLGDVLHI EATETLPMVE LPAEMAPVYE HHWEIGVLYG PHGAPDFFTD GDIGTFFATD WEVHYNSSRT GVRLIGPKPA WARTDGGEAG LHPSNIHDNA YAIGAIDFTG DMPVILGPDG PSLGGFVCPA VVVQAELWKL GQLRPGDTVR FLPISAASAA CRLSEVDQAV ASLAAPLTTR LPSAVAELGT PVLAELPALG DRPRVVYRQA GDAYLLVEYG PLVLDIELRF RVQALMDWLK ANPQPGILDL TPGIRSLQVH FDARRCDRAV LLAMLLAAEQ ALPAVDDMVV PSRTVWLPLS WDDPATKLAI EKYMQSVRKD APWCPSNIEF IRRINGLESI EQVYATVFEA SYLVLGLGDV YLGAPVATPV DPRHRLVTTK YNPARTWTPE NAVGIGGAYM CVYGMEGPGG YQFVGRTVQM WNRWNHGARG TAQFAQPWLL RFFDQVRFTP VSEQELVRWR QDFLAGRASV RIEEGSFRLS DYRQFLTDNA ASIGDFKARQ QAAFEAERER WKEAGQAEYI SESDIAAAGT DSELDLPEGA SLVVNHVPGN VWKILVTPGQ RVKAGEPLVI VESMKMEFTV PAPEDGEVLQ LLCQEASPVA AGQDLLVLKT T
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