Gene Daci_5971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5971 
Symbol 
ID5751592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6659267 
End bp6660016 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content71% 
IMG OID641301103 
Productputative transmembrane protein 
Protein accessionYP_001566984 
Protein GI160901402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCC TGACCGACTC CCTCGTCCAG TGGCTGCAGT CCGTGGGCCT GTACCCGGGC 
CCGGCCGTGC ACCACACGGT CAGCGAGGCG GCTGGCGAAG TGGCCGAGCG CGTGGGCCAG
GCCACCAGCG GCATGGACAT GGCCGGCCTG CTGGCGCTGG CCGCCGCACT GGGCTGGGCC
AGCGGCTTTA GGCTCTACGC CGTGGTCTTC GTGACCGGGC TGCTGGGCGC GCTGGGCTGG
GTGGCGCTGC CGGGCGGGCT GCATGTGCTG GAGCATCCGG CCCTGCTGTT CGCCAGCGGC
GCGCTGCTGT TCGTGGAGTT CTTCGCCGAC AAGATCCCCG GCGTGGACTC GGTCTGGGAC
CTGCTGCAAA GCGTGATCCG CATCCCGGCG GGCGCGGCGC TGGCGGCCGG TGTCTTCGGC
GCCGACAGCG CGACCATGGC CACCATGGCG GCCCTGATGG GCGGCTCGCT GGCCCTGTCC
AGCCAGGTGG CCAAGAGCAC GGCGCGCGCG GCCATCAACA CTTCGCCGGA GCCGTTTTCC
AACGTGGGCG CCAGCCTGGT GGAGGACGGT GCCTCGGTGG GCGCGATCTG GCTGGCGCTC
ACGCATCCGC TGGCCTTCGC CGCCGTGCTG CTGGTCGTGG TCATCGCCCT GTGGCTGCTG
ACCTGGGCGC TGTGGCGCTT TCTCAAGGCC GTGGTGCAGC GCCTGCGCGC GCTGTTGGGC
GGGTCTCCCG CGATGAATCA AAAACCATAG
 
Protein sequence
MSTLTDSLVQ WLQSVGLYPG PAVHHTVSEA AGEVAERVGQ ATSGMDMAGL LALAAALGWA 
SGFRLYAVVF VTGLLGALGW VALPGGLHVL EHPALLFASG ALLFVEFFAD KIPGVDSVWD
LLQSVIRIPA GAALAAGVFG ADSATMATMA ALMGGSLALS SQVAKSTARA AINTSPEPFS
NVGASLVEDG ASVGAIWLAL THPLAFAAVL LVVVIALWLL TWALWRFLKA VVQRLRALLG
GSPAMNQKP