Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5937 |
Symbol | |
ID | 5751558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 6612202 |
End bp | 6612984 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641301069 |
Product | pili assembly chaperone |
Protein accession | YP_001566950 |
Protein GI | 160901368 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGGAA AAAATCGCGG ACCTTGCCGA TTGCCATATT TTCTGGCCAT TGCCTCATTG CTGCTTTGCA GCCTCCCGGC GCATGCCAGC CTCGTCCTCT ATGGAACACG GGTCATATTT TCAGGCGACG AGACGGAAGC CACCCTCAAG ATTTCCAATG AAGGAAAATT GCCATCGCTG GTGCAGTCAT GGCTGGACAC GGGCGATGGA GATATGGCGC CCGAGGGCAT AGATGTGCCC TTTGTGATCG CGCCGTCGCT CACCCGCCTG GAAGCCTCGG ACCAGCAGAT GCTGCGCATC ATCCATTCCG GCCAGCCCCT ACTCCAAGAC AGAGAGTCAT TGTTCTGGAT CAACGTGCTG GACGTGCCGC CCAAGACCGA GAACGCGAAA GGCTCCCAGG GCAGCCTCGC ACTGGCCTTT CGCACGCGCA TCAAGCTGAT ATATCGCCCC AAGGGCCTTC CGGGCGAACC GAAGGATGCG CCTGAGCAGT TGCAGTGGTC CGCGAGCACG ACCCGAGACG GGCAGGCCGT ACTTCAGGCC CGTAATCCGA CCGCATATGT CGCCAATCTG GGCCATATCG CCGTAGAGGC AGCTGGCCAG AGTTTCAAGA TGAATGTAGG ACATGTGCTG CCAGGAGAAA CGGCAAAGTT TGCATTCCAG AAGCCCGCCG AAAACGAACA ACTACCCAAG GAGCTTCCCG CGGACGCAGT CGTGGTCTAC ACCAGCCTCA ACGACTGGGG TGGTGCCGAG GGCCACAGGG TCGAACTTGG GCGCCGACGG TAG
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Protein sequence | MPGKNRGPCR LPYFLAIASL LLCSLPAHAS LVLYGTRVIF SGDETEATLK ISNEGKLPSL VQSWLDTGDG DMAPEGIDVP FVIAPSLTRL EASDQQMLRI IHSGQPLLQD RESLFWINVL DVPPKTENAK GSQGSLALAF RTRIKLIYRP KGLPGEPKDA PEQLQWSAST TRDGQAVLQA RNPTAYVANL GHIAVEAAGQ SFKMNVGHVL PGETAKFAFQ KPAENEQLPK ELPADAVVVY TSLNDWGGAE GHRVELGRRR
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