Gene Daci_5733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5733 
Symbol 
ID5751354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6381227 
End bp6382252 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content70% 
IMG OID641300865 
Producthypothetical protein 
Protein accessionYP_001566746 
Protein GI160901164 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.558781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCG AACGTCACCC ACTTCCGCGC CCTGCCTTGC ACCCCTCTTT TCATCCCGCT 
TCGCACCGGG GCCTGCAGCG CCGCCTGCTC ATCCTGGCAG CGGCTGCCCT GCCCGGCCTT
GCGCTGGCGC AGAAATGGCC TGCGCAGCCC GTGCGCATCG TCGTGCCCTA CACGGCCGGA
GGCGGCTCGG ACAACATCGC CCGCGCGCTG GGCACGGAGC TGTCGCGCGA ACTGGGCCAG
CCCGTGGTCG TGGACAACAA GCCCGGCGCC TCGGCCATGC TGGGCGCCGA GCTGGTGGCA
CGCGCCGCGC CCGACGGCTA CACGCTGCTC CTGGCCGACA TGCCGCACAC CATCACGCCC
AGTCTCTACA AGACACCGTA CGACGCGCTC AAGGACTTCA CGCCCGTGGC CCTGATAGGC
TCTTCGCCGC TGGTGCTGGC CGTCAACCCC AAGCTCAAGG CGCAGAGCGT GAAGGAATAC
ATCGCGATGG CCAGGGCACG GCCCGGCCAG ATCAACTTCG CCTCGGGCGG CACGGGCACG
GCCACGCATC TGGCAGGCGA GCTGTTCAAG CAGCAGACGG ACACCTTCAT CACCCACATT
CCCTACAAGG GCTCGGGCCA GGCCGTCGCC GACGTGGTGG CCGGCCATAC CGAGAGCATG
TTCTCCTCGG CCCCCACCGT GATCCCCCAT ATCAAAAGCG GCGCGCTGCG CGCCCTGGCC
ACCACCGGTG CCCAGCGCTC GCCGGCCCTG CCCCAGGTGC CCACGATGGC CGAAAGCGGC
GTGCGCGGCC TGACCGTGCT GCACTGGTTC GGCCTGCTGG CGCCTGCCCG GTTGCCCCCC
GGCATACAGA CCGCGCTGCA CGATGCCGTG GCCCGCGCCA TGGCCACGCC CGCGCTCCAG
GCCAAGCTGC AGTCCCTGGG GCTGGAACTG ACGCCCCGCA CTGCGGCGGA GTTCGGCGCC
CAGATGGAGA CCGACGCCGC ACGCTGGGCC CGCGTCATCA AGGAACGCAA CATCAAGGCG
GACTGA
 
Protein sequence
MPAERHPLPR PALHPSFHPA SHRGLQRRLL ILAAAALPGL ALAQKWPAQP VRIVVPYTAG 
GGSDNIARAL GTELSRELGQ PVVVDNKPGA SAMLGAELVA RAAPDGYTLL LADMPHTITP
SLYKTPYDAL KDFTPVALIG SSPLVLAVNP KLKAQSVKEY IAMARARPGQ INFASGGTGT
ATHLAGELFK QQTDTFITHI PYKGSGQAVA DVVAGHTESM FSSAPTVIPH IKSGALRALA
TTGAQRSPAL PQVPTMAESG VRGLTVLHWF GLLAPARLPP GIQTALHDAV ARAMATPALQ
AKLQSLGLEL TPRTAAEFGA QMETDAARWA RVIKERNIKA D