Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5033 |
Symbol | |
ID | 5750644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5571842 |
End bp | 5573071 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641300157 |
Product | sodium/glutamate symporter |
Protein accession | YP_001566047 |
Protein GI | 160900465 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0786] Na+/glutamate symporter |
TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.130355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCTGA CTTTCAGCGC CTACTACACC CTGATCTTCG CCGCCCTTGT CCTTTTGCTG GGCAAATGGC TGGTGCAGCA CCTGCGCCTG CTGCGCGAAT TCAACATCCC CGAGCCCGTG GCCGGCGGTC TGGTCGTCGC CGTCGCCCTG TTCGTGCTCA ACCAGACCCT GGGCTACACC TTCAGCTTCA GCAGCGAGCT GCAGATGGCC TTCATGCTGG TGTTTTTCTC ATCCATCGGG CTGAGCGCCA ATTTCGCCAA GCTGCGCGAA GGCGGCCGTT CGCTGCTGCT GTTCCTGGCC GTGGTCGCCG TCTTCATCGG CCTGCAGGAC CTGGTGGGCG TGAGCCTGGC CACGATGCTC GGGCTCGACC CGCTGTTCGG GCTGATCGCA GGCTCCGTCA CCCTGACGGG CGGCCATGGC ACGGCGGGTG CCTGGGGCCA GGTTTTCGAG CGCGAATACG GTATTCAGGG CGCGGTCACG CTGGGCATTG CCTGTGCCAC CTTCGGACTG GTGATCGGCG GCCTGATCGG CGGCCCGCTG GCCAAGGCCC TGATCACGCG CCGCCGGCTT GCCGTGCACG ACCCCGCAGC CGCCCCCGAA AAACAGCCCC CGCTGGGCGA AAGTGCAAGC CACGGCGGCT TCGAGAATCC CGAGCAGACG CGCCTGATCA CCACCAGCGC GGCCATAGAA ACACTGGCCC TGTTCGCAGG CTGCCTGGGC TTTGCCGAGT TCATGGCGCA GTTCACCGCC GGCACCCTGT TCTCCCTGCC CACCTTCGTC TGGGCGCTGG CAGGCGGCGT CGTGATCCGC AATACGCTGG ACTATGTCTT TCACTTCCAG GTATTCGACC GGGCCATCGA CGTCTTCGGC AATGCCTCGC TGTCCATCTA CCTGGCCATG GCCCTGCTGT CGCTCAAGCT GTGGGAGCTG GCGGGGCTGG CGGCGCCGCT GATGGTGATC CTGGCGGCCC AGACCCTGGT GATGGGCCTG TATGCCGCGC TGGTGACCTT CCGCATCATG GGCAGCAACT ACGATGCGGC CGTGCTGGCC GCCGGCCACT GCGGTTTCGG CATGGGCGCC ACGCCCACGG CCGTGGCCAA CATGCAGGCC ATCACCAACC AGTACGGCCC CTCGCACAAG GCCTTCCTCA TCGTGCCGAT GGTGGGCGCC TTCTTCGTCG ACATCGTCAA TGCCACGGTG ATCCAGCTGT TCATCCGCTG GCTGCACTGA
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Protein sequence | MHLTFSAYYT LIFAALVLLL GKWLVQHLRL LREFNIPEPV AGGLVVAVAL FVLNQTLGYT FSFSSELQMA FMLVFFSSIG LSANFAKLRE GGRSLLLFLA VVAVFIGLQD LVGVSLATML GLDPLFGLIA GSVTLTGGHG TAGAWGQVFE REYGIQGAVT LGIACATFGL VIGGLIGGPL AKALITRRRL AVHDPAAAPE KQPPLGESAS HGGFENPEQT RLITTSAAIE TLALFAGCLG FAEFMAQFTA GTLFSLPTFV WALAGGVVIR NTLDYVFHFQ VFDRAIDVFG NASLSIYLAM ALLSLKLWEL AGLAAPLMVI LAAQTLVMGL YAALVTFRIM GSNYDAAVLA AGHCGFGMGA TPTAVANMQA ITNQYGPSHK AFLIVPMVGA FFVDIVNATV IQLFIRWLH
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