Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4964 |
Symbol | |
ID | 5750575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5496121 |
End bp | 5496948 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641300088 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001565978 |
Protein GI | 160900396 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.102964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCCT CGTGCATGAC CGACATCCCC GCATCCTTGA ACGAAATCCG CATTCCCACG CCGCAGGGCA GCATCTACGT CAGGCGCTGG CAGGCGCCGG CGGCCGGCGA AGGCGAACAA GGCCCGGCGC GCGCGCCCAT CGTGCTGCTG CACGACTCGC TGGGCTCGGT GGCGCTGTGG CGCGATTTCC CGCAGCAACT GGCCGAGGCC ACGCGCCGCG ATGTGCTGGC CTATGACCGG CTGGGCTTTG GCCAGTCCGA TCCCTATCCG GGCACGCTGG GGCCGGGCTT TGTGGCCCGG GAGGCAGAGA CCGCGTTCCC GGCCGTGCAC CAGGGGCTGG GCCTTGGGGA TTTCATTGTG CTGGGCCACA GCGTGGGCGG CGGCATGGCC GCCATGGTGG CGGCCCGATA TGGCGCGCAG TGCAAGGCGG TGGTCACGGA GTCCGCCCAG GCCTTTGTGG AAGATCGCAC CTTGCAGGGC ATTCGCGCGG CCCAACAGGA TTTCGCCCGG CCCGGCCAGC TGGCACGCCT GGAGAAATAC CACGGCGACA AGGCGGCCTG GGTGCTGTCT GCCTGGGTCG ATACCTGGCT GTCCCCGCCT TTTGCCGACT ACCGGCTGGA CGAGGCGCTG GAGCGCGTGC GCTGCCCGGT GCTGGCCATC CATGGAGAGC TCGACGAGTT CGGCTCCCTG GTCCACCCCG AGCGCATCCG CGACCGCGCC AGCGGCCCGG TGGAGGTGGA GATCGTGGCC GGTGGCGGCC ACGTTCCCCA CCGCGAGCAG CCCGAGCGCA TTGCCCAGCG CATCGCGCGC TTCCTGGCAC GGGTCTGA
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Protein sequence | MPSSCMTDIP ASLNEIRIPT PQGSIYVRRW QAPAAGEGEQ GPARAPIVLL HDSLGSVALW RDFPQQLAEA TRRDVLAYDR LGFGQSDPYP GTLGPGFVAR EAETAFPAVH QGLGLGDFIV LGHSVGGGMA AMVAARYGAQ CKAVVTESAQ AFVEDRTLQG IRAAQQDFAR PGQLARLEKY HGDKAAWVLS AWVDTWLSPP FADYRLDEAL ERVRCPVLAI HGELDEFGSL VHPERIRDRA SGPVEVEIVA GGGHVPHREQ PERIAQRIAR FLARV
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