Gene Daci_4964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4964 
Symbol 
ID5750575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp5496121 
End bp5496948 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content70% 
IMG OID641300088 
Productalpha/beta hydrolase fold 
Protein accessionYP_001565978 
Protein GI160900396 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.102964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCCT CGTGCATGAC CGACATCCCC GCATCCTTGA ACGAAATCCG CATTCCCACG 
CCGCAGGGCA GCATCTACGT CAGGCGCTGG CAGGCGCCGG CGGCCGGCGA AGGCGAACAA
GGCCCGGCGC GCGCGCCCAT CGTGCTGCTG CACGACTCGC TGGGCTCGGT GGCGCTGTGG
CGCGATTTCC CGCAGCAACT GGCCGAGGCC ACGCGCCGCG ATGTGCTGGC CTATGACCGG
CTGGGCTTTG GCCAGTCCGA TCCCTATCCG GGCACGCTGG GGCCGGGCTT TGTGGCCCGG
GAGGCAGAGA CCGCGTTCCC GGCCGTGCAC CAGGGGCTGG GCCTTGGGGA TTTCATTGTG
CTGGGCCACA GCGTGGGCGG CGGCATGGCC GCCATGGTGG CGGCCCGATA TGGCGCGCAG
TGCAAGGCGG TGGTCACGGA GTCCGCCCAG GCCTTTGTGG AAGATCGCAC CTTGCAGGGC
ATTCGCGCGG CCCAACAGGA TTTCGCCCGG CCCGGCCAGC TGGCACGCCT GGAGAAATAC
CACGGCGACA AGGCGGCCTG GGTGCTGTCT GCCTGGGTCG ATACCTGGCT GTCCCCGCCT
TTTGCCGACT ACCGGCTGGA CGAGGCGCTG GAGCGCGTGC GCTGCCCGGT GCTGGCCATC
CATGGAGAGC TCGACGAGTT CGGCTCCCTG GTCCACCCCG AGCGCATCCG CGACCGCGCC
AGCGGCCCGG TGGAGGTGGA GATCGTGGCC GGTGGCGGCC ACGTTCCCCA CCGCGAGCAG
CCCGAGCGCA TTGCCCAGCG CATCGCGCGC TTCCTGGCAC GGGTCTGA
 
Protein sequence
MPSSCMTDIP ASLNEIRIPT PQGSIYVRRW QAPAAGEGEQ GPARAPIVLL HDSLGSVALW 
RDFPQQLAEA TRRDVLAYDR LGFGQSDPYP GTLGPGFVAR EAETAFPAVH QGLGLGDFIV
LGHSVGGGMA AMVAARYGAQ CKAVVTESAQ AFVEDRTLQG IRAAQQDFAR PGQLARLEKY
HGDKAAWVLS AWVDTWLSPP FADYRLDEAL ERVRCPVLAI HGELDEFGSL VHPERIRDRA
SGPVEVEIVA GGGHVPHREQ PERIAQRIAR FLARV