Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4868 |
Symbol | |
ID | 5750474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5382202 |
End bp | 5382915 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641299987 |
Product | ECF subfamily RNA polymerase sigma-24 factor |
Protein accession | YP_001565882 |
Protein GI | 160900300 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.988869 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATTGCA GCAGACATTA TCGCACTGCA ACAAGCCTTC GCGCCATCCT GCGAAAAAAA TTGACAGTGC GGTGCGATAA TCAGGCCCCG CACCCGTTCA GCCCCTCATC AACGAGCCCC TCATCCGGGC CTGCGTTCCT TTTGGCAACC GAGCAAGAAC TATCCGACTT CCTCAAAAGC GTAGAAAAGC GAGCCTTCAA GCGCAGCTTT TTTCACGTCC GGGATGAGGA GGCGGCGCTG AACATCGTGC AGGACAGCAT GCTCAAGCTG GCGCTGCACT ATGGCGACAA GCCCATCAAC GAGCTGCCCA TGCTGTTCCA GCGCATCCTG TCCAACAGCA CGCTGGACTG GTTTCGCAGG CAAAAAACGC AGAACGCCCT CTTCACCCGC ATGAGCGATC TGGAGGCGTC GGCCGGCGAC GATGCGGACT TCGACTGGCT CGAAACCTAT GCCGACTCCG GCCAGAACGG CGAAACCGCC CGCAGCGCCG AAGATCTGAC CGAGCGGGCC CAGATTTTGC AAAGCATTGA AAAAGAGATA CAGGAGCTTC CAGCACGTCA ACGCGAAGCT TTCCTGATGC GTTATTGGGA AGAGATGGAC GTCGCGGAGA CCGCTGCCGC GATGGGGTGT TCCGAAGGAA GTGTAAAAAC ACATTGTTTC CGCGCCATCC AGACATTGAG CAAGGCACTG AAGGCCAAAG GAATCGAGCT ATGA
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Protein sequence | MNCSRHYRTA TSLRAILRKK LTVRCDNQAP HPFSPSSTSP SSGPAFLLAT EQELSDFLKS VEKRAFKRSF FHVRDEEAAL NIVQDSMLKL ALHYGDKPIN ELPMLFQRIL SNSTLDWFRR QKTQNALFTR MSDLEASAGD DADFDWLETY ADSGQNGETA RSAEDLTERA QILQSIEKEI QELPARQREA FLMRYWEEMD VAETAAAMGC SEGSVKTHCF RAIQTLSKAL KAKGIEL
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