Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4855 |
Symbol | |
ID | 5750458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 5367919 |
End bp | 5368458 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641299971 |
Product | peptide deformylase |
Protein accession | YP_001565869 |
Protein GI | 160900287 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTCC GCACCATTTT GAAGATGGGC GATCCGCGCC TGCTGCGCGT CGCCCAGCCC GTGACCGAAT TCGACACCGA CGAACTGCAC CTGCTGCTCA GCGATTTGCT GGACACCATG CATGCAGCCA ACGGCGCGGG GCTGGCCGCG CCGCAGATTG GCGTGGACCT GCAGATGGTG GTGTTCGGCT CCGGCCTGCC CAATCCACGC TACCCCGATG CGCCCGTGGT GCCGCGCACC GTGCTCATCA ACCCGGTCAT CACGCCCATG GGCGAGGACG AGCACCTGGA CTGGGAAGGC TGCCTGTCCG TGCCCGGAAT GCGCGGCATG GTGCCGCGCT GGAACCATAT CCGCTACACG GGCTTCGATG TGTTTGGCGA TGCCATCGAC CGCACGGTGG ACGGCTTTCA TGCGCGCGTG GTCCAGCATG AGTGCGATCA CCTCTGGGGA AAGCTCTATC CCATGCGCAT GCGTGACTTC AGCCAGTTCG GCTTCACCGA TGTGCTGTTC CCCGGCATCA GCGCGGCCGA GGACGACTGA
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Protein sequence | MTVRTILKMG DPRLLRVAQP VTEFDTDELH LLLSDLLDTM HAANGAGLAA PQIGVDLQMV VFGSGLPNPR YPDAPVVPRT VLINPVITPM GEDEHLDWEG CLSVPGMRGM VPRWNHIRYT GFDVFGDAID RTVDGFHARV VQHECDHLWG KLYPMRMRDF SQFGFTDVLF PGISAAEDD
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