Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4618 |
Symbol | |
ID | 5750208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 5079792 |
End bp | 5080742 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641299721 |
Product | hypothetical protein |
Protein accession | YP_001565632 |
Protein GI | 160900050 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00139965 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGAACACCT CCCATCGCAG ATCTGCCTAT GCCTGCCTGG CGCTGAGCAT GTCCCTGGTC GGCAGCTATG TCGCCCTCTC CAAGCCTCTG GCGGCCATTT TTCCGGTGCT GCTGCTGGCC TGGCTGCGCT TTGGCATCGG GGCCATCGCC ATGCTGCGCT GGCTGCGCAA GCCGGCTGAC GAGGCACCCC TGTCTCGGCG CACGCAGGGC CTGCTGTTTC TTGAGTCGCT GTTCGGCAAC TTCCTCTTCA CCATCTGCAT GGTGACTGGG GTGAGCCTGA CAAGCGCCGT CACGGCCGGC GTGACCATGG CTGCCATCCC TGCTGCCGTG GCCTTGATGA GCTGGCTGTT TCTGCGCGAG CGCGTGGCTG CGCGCACCTG GCTGGCCATT GCGCTGGCCG TGGCGGGCAT CGGCCTGTAT GCACTGTCCC GCCCGGACGC TGGCGCCGCC TCGGCAGCAT CAGCCTCACC GCAGGCGTGG CTGGGGCAGA TGCTGCTGGT CGGTGCCGTG CTTTGCGAGG CGTTCTACGC CGTCATCGGC AAGCGCCTGA CCACGTCCCT GGGGTCCAAG CGCATCACAT CCATCGTCAA TCTATGGGGA TTTGCGCTGT CTACGCCCTT CGGGCTGTAT CTGGCGTGGC GCTTCGACTT CGGCAGCGTG GCATGGAGCA TCTGGGGTCT GTTGCTGTTC TACGCCCTTG CCGCCTGCGT GTGGACCGTG TGGTTGTGGA TGACAGGCTT GCGCAACGTG CCAGCCTCCC AGGCCGGCAC CTTTACGGTA CTGCTGCCGA TCAGCGCTGC CGTGGTCGGC ATGTGCGTGC TGGGCGAACG GGTCACATCC ATGCAGGCGC TGGCCTTTGC GATCGCCCTG CTGGGCATTC TCGTGGCCAC CTGGCCGGGC AGAAAACGCC TTGCACAACA CCCTTCCGCG AGCGGTGCCA GCCCCCTCTG A
|
Protein sequence | MNTSHRRSAY ACLALSMSLV GSYVALSKPL AAIFPVLLLA WLRFGIGAIA MLRWLRKPAD EAPLSRRTQG LLFLESLFGN FLFTICMVTG VSLTSAVTAG VTMAAIPAAV ALMSWLFLRE RVAARTWLAI ALAVAGIGLY ALSRPDAGAA SAASASPQAW LGQMLLVGAV LCEAFYAVIG KRLTTSLGSK RITSIVNLWG FALSTPFGLY LAWRFDFGSV AWSIWGLLLF YALAACVWTV WLWMTGLRNV PASQAGTFTV LLPISAAVVG MCVLGERVTS MQALAFAIAL LGILVATWPG RKRLAQHPSA SGASPL
|
| |