| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4546 |
|---|
| Symbol | |
|---|
| ID | 5750134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 4998969 |
|---|
| End bp | 4999553 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641299647 |
|---|
| Product | pyridoxamine 5'-phosphate oxidase-related FMN-binding |
|---|
| Protein accession | YP_001565560 |
|---|
| Protein GI | 160899978 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0748] Putative heme iron utilization protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.158817 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.600286 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTTTCGC AAGCCGGCCA CAGGTACGAT GGCGCCATGC CCTCCACGCC CGCCATGCCC
TCCACGCCCC ACCTGTCCCG CCTGCAGCTG TCGCTGCGCG ATCTGCTGGC CCGCCGCCGC
AGCGCGGCCC TGGCCACCCA GCCCACCGAC TCCCCTGCCC CCGGGGCTGG CGATGCACTG
CCCGCTCCCC GGCTGTCCAT GGTGCCCTGG GCCTGGAATG CGCAGTTTGG CTGCTTTGTG
CTGCACGTCA GCGCACTGGC AGCGCACACG CGGGCCATGG AGCTGCACCC GGCCGTCAGC
CTGCTGGTGT GCGCGGCCGA AGTGGACGGC GAGGGCGTGC ATGCACTGGA GCGCGTGGCC
ATAGAAGGCG TGGCCAGCAC ACCGCCGCCC GGCAGCGTGC TGGCCGATGG CGCGCGCGAC
AGCTATGTGC TGCGCTTCCC CGAAGCCGCG TTCATGACCG ATCTGGGCGA CTTCCGCTTT
GTCTGCATCA CGCCATCCAT CGCCCGGCAC GTGGCGGGCT TTGGCGCGGC GCGCGATGTG
TCGGCCCATG ACCTGATCGA AGCACTGAGC ATCCAGCCCA GCTGA
|
|---|
| Protein sequence | MLSQAGHRYD GAMPSTPAMP STPHLSRLQL SLRDLLARRR SAALATQPTD SPAPGAGDAL
PAPRLSMVPW AWNAQFGCFV LHVSALAAHT RAMELHPAVS LLVCAAEVDG EGVHALERVA
IEGVASTPPP GSVLADGARD SYVLRFPEAA FMTDLGDFRF VCITPSIARH VAGFGAARDV
SAHDLIEALS IQPS
|
|---|
| |