| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4490 |
|---|
| Symbol | |
|---|
| ID | 5750078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 4913315 |
|---|
| End bp | 4913803 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641299591 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001565504 |
|---|
| Protein GI | 160899922 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCACG CTCCCGACCT GGAGTCGCGC GCCGCGCCCG ACGACCACCA TGCGCTGCGC
CTGTGGCTGC GCATGCTCAC CTGCTGCAAC CTCATCGAAG GCGAGATCCG CAACCGCCTG
CGCAGCGAAT TCGACACCAC CCTGCCCCGC TTCGACCTCA TGGCCCAGCT GCAGCGCGCG
CCCGAGGGCA TGAAGATGGG CGAGCTGTCG CGCCACATGA TGGTGACCAA CGGCAACATC
ACCGGCATCA CCGACCAGTT GGAGAAAGAG GGCCTGGTGG TGCGCACCAA GGTGGAGTCC
GACCGGCGCA GCTCCGTGCT GCACCTCACC CCGCTGGGCC GCAAGACCTT TGCGCGCATG
GCCAAGGCGC ATGAGTCCTG GGTCATGGGC ATGTTCGGCG ACATGCCGCA GGCCAGCCGC
AACGACCTGT ACCAGGCGCT GGGCGACCTC AAGCAGCAGG TGGTGGCCCA CCGCTCGCCC
ACGGACTGA
|
|---|
| Protein sequence | MTHAPDLESR AAPDDHHALR LWLRMLTCCN LIEGEIRNRL RSEFDTTLPR FDLMAQLQRA
PEGMKMGELS RHMMVTNGNI TGITDQLEKE GLVVRTKVES DRRSSVLHLT PLGRKTFARM
AKAHESWVMG MFGDMPQASR NDLYQALGDL KQQVVAHRSP TD
|
|---|
| |