| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4343 |
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| Symbol | |
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| ID | 5749931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 4754954 |
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| End bp | 4756351 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641299446 |
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| Product | putative DNA topoisomerase, type I |
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| Protein accession | YP_001565359 |
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| Protein GI | 160899777 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3569] Topoisomerase IB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.466096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0120507 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTTG CCACGGCAAC GCCAAGGCCG GCCCCGCCTG CCACCCCTAC AGGAGCAACT
TCCCATGATC ACTTCGGTAC CTGCACCCCC TGTCACCCCA CCTGTCACCC CGCCTGTTGC
GCCCCCCGTC AACCCGCCAC CCACCGAGCC GCTGGTTCCG CCCGTGGGCG ACCCGCCACC
GGCCCCGGCA CCTTCGCCCT ATTCCGACCC GCCCATTGCC CCGCCTCCAC CGCCGCCGCA
GGGGGTGCAC TGAGCTCCGC GCCAGCCAGG GACAGGGCAG CGAACGCAGA CGGCCCCGGC
CCTGCCCTGA CCTATGTGAA CGACCGCATG CCCGGCTGGC GCCGCGTGCG GCGCGGCAAG
GGCTTTTCCT ATGTGGCACA GGACGGCAAG CCCGTGCGCG ATGCCCAGGC ACTGGCGCGC
ATCCGCAAAC TCGCCATTCC ACCGGCCTAT GTGGATGTCT GGATCTGCCC CGATCCCCAG
GGCCACCTGC AGGCCACGGG CCGCGACGCC CGGGGCCGCA AGCAGTACCG CTACCACCCG
CAGTGGCAGG AACAGCGCAA GCAGGTCAAG TTCGACCGCA TGCGCGCCTT TGGCCGCCAC
CTGCCCGCCA TCCGTCGGGC GGTGGCGCGC GACCTCAAGC CTGGCCGGCC GCAGCTGGAC
ACCGTGGTGG CCGCCATCGT CTGGCTGCTG GACTGCACGG CCCTGCGCAT AGGCAATGAC
GAGTATTCCG AGAGCAATGG CTCCTACGGC CTCACCACGC TCAGGAACCG CCATGCCCAG
GTGCACGCGG GTGAGCTGAC GCTGAGCTTC AAGGGCAAGA GCGGCGTGCT GCAGCAGGCC
CGCGTGTCCG ACCGGGCCGT GGCCCGCATC GTCAAGCGCT GCCAGGAGTT GCCGGGCCAG
CGGCTGTTCC AGTTCATCGA CGATGAAGGC GAAGTCCACC ATGTGCGATC CGAGCATGTG
AACGACTACA TCCGCAGGAT TTGCGGCAAG GCTGCGGCCC ATGGGGCTGA TGCCGCTGAT
GCCGCAGATG CCGCAGACGG CCCGGATTTC AGCGCCAAGG ATTTCCGCAC CTGGCATGCC
AGCGTGTACG CGCTGGAACT GGCGCTGGAA CTGGCGCTGA CCGCAGGCAA GGCAGCGTCG
CAAGAAGGCG CAGGCACCAG TGCGGCGGCG CTGAACGCTC TGGTCACGCA GGTCGCCCGG
CGCCTGGGCA ATACCTGTGC GGTTTGCCGC AAGTTCTACA TCCATCCCCA GGTGCTGGCC
CTGTGCGAGC AACCTGGACA GGACATTCCC ACCGCACCGG ACAGGCGCCC GCGCGGACTG
AGCGCCAAGG AATGCCTGTT CCTGGGGCTG CTGCAGCCCC GCAGCGGCCG GCGCGCCAGT
CGCCAGCCGC CTCCCTGA
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| Protein sequence | MALATATPRP APPATPTGAT SHDHFGTCTP CHPTCHPACC APRQPATHRA AGSARGRPAT
GPGTFALFRP AHCPASTAAA GGALSSAPAR DRAANADGPG PALTYVNDRM PGWRRVRRGK
GFSYVAQDGK PVRDAQALAR IRKLAIPPAY VDVWICPDPQ GHLQATGRDA RGRKQYRYHP
QWQEQRKQVK FDRMRAFGRH LPAIRRAVAR DLKPGRPQLD TVVAAIVWLL DCTALRIGND
EYSESNGSYG LTTLRNRHAQ VHAGELTLSF KGKSGVLQQA RVSDRAVARI VKRCQELPGQ
RLFQFIDDEG EVHHVRSEHV NDYIRRICGK AAAHGADAAD AADAADGPDF SAKDFRTWHA
SVYALELALE LALTAGKAAS QEGAGTSAAA LNALVTQVAR RLGNTCAVCR KFYIHPQVLA
LCEQPGQDIP TAPDRRPRGL SAKECLFLGL LQPRSGRRAS RQPPP
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