| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4325 |
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| Symbol | |
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| ID | 5749913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4730221 |
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| End bp | 4731825 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641299428 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001565341 |
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| Protein GI | 160899759 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0641194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGA CGCTGGGAGA CACATTGGCC TGGCCGGCAC GTTACCTGCC GAACAAGGAA
GCCCTGGTCG CGTGGGAGGG CGGCGAGCGC CGCGTCTGGA CCTACGCCCA GCTCGATGCC
GAAGTCAACC GCCACGCGCA CGGCCTGGCC GAGCTGGGCA TAGGCCATGG CGACGTGGTC
GCGGCCTTTC TCTACAACAC GCCGGCCTTT GTCTTCACCA TGCTGGCGGC CGCGCGCCTG
GGCGCCATCT TCAACCCCAT CAACTACCGG CTGGCGGCGC AGGAGCTGGC CTTCATCCTC
AAGGACGGCG CAGCGCGCGC CCTGGTGTTC GAGCACGAGG GCGGCGAGGT GGCCGCACGC
GCCCAGGCCC TGCTCAAGGC CGAAGGCGGC GGCACTGGCG CAGGCATCGA GCACTGGATC
TTTGCCGACG ATGCCCCGGC CGACCCGCTG CCGGTCTGGG CCACGCAGCG CCTGTCCGCC
CTGGCCAGGG GCCGCAGCAG CGCGCCGCCC CAGGCCCATG TGCGCGAGAG CGATCCCTGC
ATCCTCATGT ACACCAGCGG CACCACGGGC CGGCCCAAGG GCGTGCTGCA TACGCACCGC
AGCAAGCTGG CGCACAACGC CCTCATGCAC CAGACCATGC AGTTCACGCG CGACGACGTG
GGCCTGGCCA TGGCGCCGCT CAACCACACG GCCGAGCTGC ACACCAGCTT TTTGCCGCGC
CTGCAGGCCG GTGCCACCCA GGTGCTGCTG CGCCGCTTCG ACGTGACCGA GGCCTGGCGC
CTGATCCACG AAGAGCGCGT GAGCTTCTTC TTCGCGGCGC CCACCATGGT CACCATGCTG
CTGGCCGACC CCATTGCCTC GCCTGAGCAG GCGCCCGCGC TGCGGCTGGT GGAGTACGGC
GGCGCCTCCA TGGCGCCGCA CCTGATCCGC GAATGGACAC GCAAGGTCGG CAGCGACCTG
GTCCAGGTCT ACGGCACCAC CGAGATGGGG CCCTGCATGT CCATCCTCCT GCCGCGCGAG
CAACTCTCGC ACGCGGGCTC GGCGGGGCTG CCCTCCATGG GCCATGACCT CATCGTGGCG
CGCCTGCGCG AAGACAACGC CCCCACCGAT CCGGCCGAGG CCTGCCTGCC CGGCGAGGTG
GGCGAGATCC TGGTGCGCGG CCCCTGCATG ATGGCCGGCT ACCTCAACCG CCCCGACGCC
AACACCCGCG CCCTGGCGCA CGGCTGGTAC CACACGGGCG ACCTGGGCCA CATCGACGAC
GACGGCTATC TCTGGATCCG TGACCGCATC GACTACATGA TCAATTCGGG CGCCGAGAAC
GTCTATCCCC GCGAAGTGGA AGACGCGCTG GTCGAACACG CCGATGTGCT CGAGGTCGCC
GTCATCGGCG AGGCCGACGA GCGCTGGGGC CAGATCGTCG CCGCCCACGT GGTCGCCAAG
CCTGGCGCCA CGCCCACGGC CGAGGCGCTG GACGCCTTCC TGGTCCACGG CGACCGCCTG
GCCGCCTACA AGCGCCCGCG CCGCTACCAC TTCCGCGAGG CCCTGCCCAA GACGGCCAGC
GGGAAGATAC AGAAGCAGTT GCTGCGGGTG GTGGTGGCAG CCTGA
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| Protein sequence | MQQTLGDTLA WPARYLPNKE ALVAWEGGER RVWTYAQLDA EVNRHAHGLA ELGIGHGDVV
AAFLYNTPAF VFTMLAAARL GAIFNPINYR LAAQELAFIL KDGAARALVF EHEGGEVAAR
AQALLKAEGG GTGAGIEHWI FADDAPADPL PVWATQRLSA LARGRSSAPP QAHVRESDPC
ILMYTSGTTG RPKGVLHTHR SKLAHNALMH QTMQFTRDDV GLAMAPLNHT AELHTSFLPR
LQAGATQVLL RRFDVTEAWR LIHEERVSFF FAAPTMVTML LADPIASPEQ APALRLVEYG
GASMAPHLIR EWTRKVGSDL VQVYGTTEMG PCMSILLPRE QLSHAGSAGL PSMGHDLIVA
RLREDNAPTD PAEACLPGEV GEILVRGPCM MAGYLNRPDA NTRALAHGWY HTGDLGHIDD
DGYLWIRDRI DYMINSGAEN VYPREVEDAL VEHADVLEVA VIGEADERWG QIVAAHVVAK
PGATPTAEAL DAFLVHGDRL AAYKRPRRYH FREALPKTAS GKIQKQLLRV VVAA
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