Gene Daci_4279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4279 
Symbol 
ID5749867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4682874 
End bp4683809 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content73% 
IMG OID641299382 
Productamidohydrolase 2 
Protein accessionYP_001565295 
Protein GI160899713 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGCG ACAGCCTTGC CGTGCCCGTC CGTTTCTCGC AGGGCAGCGC CCGGCCCCGT 
GCCACGCTGC CCCCGGATGC CTGCGACTGC CATGTGCATG TCTATGACGG CCGCTACCCG
GCAACCCCGG GCGCGCGGCT GCTGCCGCCC GACGCCTCGG CCGGCGACTA CCGCGCGCTG
CAGCGGCGCC TGGGCACCTC GCGCTGCGTG CTGGTCACGC CGTCCACCTA CGGCAGCGAC
AACCGCTGCA TGTTGGATGG GCTGGCCGCC CTCGGCCCGC AGGCGCGGGG CGTGGCTGTG
ATCGATGGCA GTGAAAGCGA TGACCAGCTG CAGCGCCTGC ACGGCCTGGG CGTGCGCGGC
GTGCGGCTGA ACCTGTCGCT GGGCGTGACG GGCACGGCCG AGCTGCTGGT GCCGCTGGCC
CGCCGCATCG CGCCGCTGGG CTGGCACCTG CAGCTGCTGA TGGCGCCGGA CCTGCTGGCG
TCCCTGGCCG GCGTGCTGCG GCAATTGCCG GTGCCGCTGG TGTTCGACCA CTTCGGCCGC
ATCGCCCCGG TGCAGGCGGG GCGCCATGCG GGCCATGCGC TGCTGCTGGA GCTGCTGGAG
GGCGGCAGGG CCTGGGTCAA GTTGTCCGGC GGCTACATCG TCAGCGCGCT GCAGTCGGTC
GAAGACCCGG CGCTGGATGC CCTGGCCGCC AGCTTTCTGC ACTGCGCGCC CGAGCGCGTG
CTCTGGGGCA GCGACTGGCC GCATGTCAGC GCCTTGGCAG GCATGCAGCC CCTGCCCGAT
GACGCCCGCC AGATCGACCG CCTGGCCGAC TGGACCTCCC ATGCCGGCGG TGCCGCCACG
CTGCAGCGCG TGCTGGTGGA CAACCCCCGG GCGCTGTACG GCTTCGAGAC GGCAGCGCCG
ACATCGCTTT GCACACAAGC AGGAGACAAA CCATGA
 
Protein sequence
MDCDSLAVPV RFSQGSARPR ATLPPDACDC HVHVYDGRYP ATPGARLLPP DASAGDYRAL 
QRRLGTSRCV LVTPSTYGSD NRCMLDGLAA LGPQARGVAV IDGSESDDQL QRLHGLGVRG
VRLNLSLGVT GTAELLVPLA RRIAPLGWHL QLLMAPDLLA SLAGVLRQLP VPLVFDHFGR
IAPVQAGRHA GHALLLELLE GGRAWVKLSG GYIVSALQSV EDPALDALAA SFLHCAPERV
LWGSDWPHVS ALAGMQPLPD DARQIDRLAD WTSHAGGAAT LQRVLVDNPR ALYGFETAAP
TSLCTQAGDK P