Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4267 |
Symbol | |
ID | 5749855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4670709 |
End bp | 4671251 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641299370 |
Product | LuxR family transcriptional regulator |
Protein accession | YP_001565283 |
Protein GI | 160899701 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.130529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATAG ATTACCGGCT GGCGTTCGAA GCCGCCCCCG TCGGCCTCGT GATCTCGCGC AATCGCACCA TGATCGACTG CAACCGCCAG GTCTGCGAGA TGTTCGAGGC CTCGCGCGAG GTGCTGATCG GCCAGACCTT CCAGATCCTC TACCCCAGCG CCGACGAGTA CGAGCGGCTG GGCGCGCGCA TCGCGCCCAT TCTCAACGCC CGGGGTTTCT ACTCGGACAA CCGCATCATG AAGCGCGCCA ACGGCGAAAC GTTCTGGTGC CATGTCACGG GCCGCACGCT GGACCGCAGC GACCCGCACG CATCGGGCAT CTGGAGCTTC GAGGACCTCA GCGCCCACCG TCCCGTCAAG GCCGAGCTCA CGGGGCGCGA GCGCGAGGTG GCCGCCCGCC TGCTGGAGGG GCTTACCTCC AAGGAAATCG GCCGCGCCCT GGCCATCAGC CACCGCACGG TGGAGATCTA CCGCGCACGG CTGATGCGCA AGTACGGCGC CTCCACGGCC GCCGACCTGG TCCACAAGCT GGTCTCTGGC TGA
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Protein sequence | MDIDYRLAFE AAPVGLVISR NRTMIDCNRQ VCEMFEASRE VLIGQTFQIL YPSADEYERL GARIAPILNA RGFYSDNRIM KRANGETFWC HVTGRTLDRS DPHASGIWSF EDLSAHRPVK AELTGREREV AARLLEGLTS KEIGRALAIS HRTVEIYRAR LMRKYGASTA ADLVHKLVSG
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