Gene Daci_4260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_4260 
Symbol 
ID5749848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4661421 
End bp4661921 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content69% 
IMG OID641299363 
Producthypothetical protein 
Protein accessionYP_001565276 
Protein GI160899694 
COG category[S] Function unknown 
COG ID[COG1720] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00104] probable methyltransferase, YaeB/AF_0241 family 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.905923 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.100966 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGG CCGGCTCCAC GGCGCAGGCC ATCGCCTGCC GCCCCATCGG CCATGTGCGC 
AGCCGCTTCA CCGACCCGGT GGGCATGCCC ATACAGACGG CGGGCGCGGC CGACGAGGCC
GGCAGCGTGG AGCTGCTGCC CGAGTTCGAG GCCGGGCTGC GCGACATCGA AGGCTTTGAC
TACCTGATCC TCATCACCCA CCTGCACCAG GCCGTGGAAA AGCTGGAAGT CGTGCCCTTC
ATGGACGACA GCAGCCACGG CGTGTTCGCC ACGCGCGCCC CGGCGCGGCC CAACCGGCTG
GGCCTGTCCA TCGTGCGCCT GGTGCGGCGC GAAGGACTGC TGCTGCATTT CCTGGGCAAC
GACATGCTGG ACGGCACGCC CGTGCTCGAC ATCAAGCCCT ACGTGCCCAG GCTGGATGTG
CGCCAGACCG AGCGCATAGG CTGGTTCGGC AAGCGCATAG ACCAGATGCC GGACATCCGC
GCGGACGCCC GCATGGCCTG A
 
Protein sequence
MSAAGSTAQA IACRPIGHVR SRFTDPVGMP IQTAGAADEA GSVELLPEFE AGLRDIEGFD 
YLILITHLHQ AVEKLEVVPF MDDSSHGVFA TRAPARPNRL GLSIVRLVRR EGLLLHFLGN
DMLDGTPVLD IKPYVPRLDV RQTERIGWFG KRIDQMPDIR ADARMA