Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_4255 |
Symbol | |
ID | 5749843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 4655058 |
End bp | 4655852 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641299358 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001565271 |
Protein GI | 160899689 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0499981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.128098 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGGAAAA ACGATCTTCT GGCCGGCCAG CGCGTCCTGG TGACGGCGGG CGCCGCCGGA ATCGGCCTGG AAATCAGCCG CGCCTTTGCC GAGGCCGGCG CGCGCGTCAT GGTCTGTGAC GTGGCCCAGG CCAGCCTGGA TGCGCTGGCT GCCGCCCTGC CCGGCGCCAG CGGCCGTCTT GCCGATGTGT CGGATGCCTT GCAGGTGCAG GCCCTGTTCA AGGCCGTGGA CAACGAGTTG GGCGGCCTGG ACATCCTCGT CAACAACGCC GGGGTGGCCG GCCCCACGGG CGCGGTGGAG ACGCTGGACC TGGCCGACTG GCAGCGCACG CTGGATGTGA ACATCACCGG CGCCTTCCTG TGCACGCGGC TGGCCGTGCC CCGGCTCCGG CAATCGGCAC GCGAGGGCCG GCAGGCAGCC ATCGTCAACC TGTCTTCGGC GGCAGGCCAC CTGGGCATGC CGGGCCGCTC GGCCTATTCG GCGTCCAAGT GGGCGGTGAT CGGCTTCACC AAGTCGCTGG CGCTGGAGCT GGGCGCCGAC GGCATCCGGG TGAACGCCAT CCTGCCGGGC GCCGTGGACG GCCCGCGCAT CCGCGATGTG ATTGCCGCCA AGGCGCAGGC GCGCGGCCTG CCGCTGGAGG ACGTCACGCG CAGCTACACG CACCAGGCCG CGCTGGGCCG CATGGCCACG GCGCGCGACA TTGCCAACAT GGCCGTGTTT GCCGCCAGCC CGCTGGCCGG CCATGTCACG GGCCAGGAGC TGGCCGTCGA TGGGCTGACA CAGGCGCTGA GCTGA
|
Protein sequence | MWKNDLLAGQ RVLVTAGAAG IGLEISRAFA EAGARVMVCD VAQASLDALA AALPGASGRL ADVSDALQVQ ALFKAVDNEL GGLDILVNNA GVAGPTGAVE TLDLADWQRT LDVNITGAFL CTRLAVPRLR QSAREGRQAA IVNLSSAAGH LGMPGRSAYS ASKWAVIGFT KSLALELGAD GIRVNAILPG AVDGPRIRDV IAAKAQARGL PLEDVTRSYT HQAALGRMAT ARDIANMAVF AASPLAGHVT GQELAVDGLT QALS
|
| |