| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_4186 |
|---|
| Symbol | |
|---|
| ID | 5749774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 4576423 |
|---|
| End bp | 4577946 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641299289 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001565202 |
|---|
| Protein GI | 160899620 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.940999 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.721152 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTTT TCACCACCGA CTACTTGGAG TACTACCTGA CGCTGGTGTC GTGGATCGTC
CATAACGGCA TCTGGGCCGT GCTGGTGGCG AGCGGTGTAT TCGCGTTGCC TTTCATTGCC
ATCATCGTGC AGGAGTGGCT GAAGGCCCGC GCGGAAGGCG CCGACGAAGG CAACAAGGGC
GTGCTCTCGG CTGCGCGCAT CGAGAACCGG GTCTTCGTCG CCATCGTGGT GGTGATGTTC
GCCGGCATCC CATTCATCGA CGTGGATCTC AACACCATCC GCTACGACAG CTCGCGCTCG
GCCCAATGCC AGGTCAGCGT GCCGCAGCCC ACCGATACCG GCTGGTCGCA GTCCTTCAGC
ACTATCAACA ACCAGTCGGC GAAGGTGCCC GTCTGGTGGG CCTTTATGCA CACACTCTCG
CGAGCAGTGA CCGGTGCCTC TGTGGCGGCG ATTCCCTGCG GCACCGACTT GCGGCAGATG
CGCATGGAGA TCGACGCGAC CCGCATCGAC AACCCGGTGC TGGCTCAGGA AGTGGCGGAT
TTCTCGCGCG ACTGCTACGG ACCGGCGCGC GCCAAACTCT TCATGCAGCG CCCGAACCTC
GATGAGGCGC AGATGCACGA CGTGACCTGG ATCGGCTCGC GCTTCTTCAC TGACACGGGC
GGCTACTACG ACACCTACCG CTCCAGCACA CCACGCGATG ACTGGCCTTA CGACAGCAAC
CGTGATGCTG GGCTTGCGCA GGTGGCCAGC GGTGGCGGCT ATCCGTCCTG CAGGCAGTGG
TGGGCCGATG GCAGCAATGG CCTGCGTGCA CGCCTGCTGG GGCAGGTAAA CCCAAGCCTG
CTGAATCGCC TGGCGGGCTG GGCCGGATTC CTGACCCGTG CCGATGTGGA CGACTCGGTG
ATCCGCACCA TCGCCTCGCC GAGGCAGCAG AAACTGAACC AGGGCAGCGT CTATACGGAC
TACGGCGGTC AGATCGACAA GACCCTGCCG AACATCGTAA CGCGGGCCAC GGGCGACGTC
GGCATGGCTT TCGGCGCGAT TGCCGCGTTT CCCGCCATGG ACGTGGTGCG CCAGGCGCTG
CCTATGGTGC TCGCCTTGCT CAAGATGGCG CTGGTCATCT GCATCCCGCT GGTGCTGGTC
GTGGGCACCT ACGACCTGAA GACCGTCGTT ACCGTGAGCG TCGTGCAGTT CGCGCTATTC
TTCGTCGATT TCTGGTTCCA GCTCGCGCGC TGGATCGACA GCACCATCCT CGATGCGCTC
TACGGCTGGG GCTTCGGCTG GAACCGGCCA CACAGCAACT TCGACCCGCT GGTGGGGCTG
AACAACGCCT TTGGCGACAT GCTCCTGATG TTCGTCACGG GAACGATGTT TATTGTGCTG
CCTACGTTCT GGATCATGGC CCTGGCTTGG GCGGGCGTTC GCGCCGGTAA CGTCTTACAA
GGCCTGGCTG GAGCTACCGG AGATGCCAAG GCCGCTGGCG GAAAGGGAGG AAGTACCGCA
ATCAGCGCGG TGCCGAAGAA GTGA
|
|---|
| Protein sequence | MTLFTTDYLE YYLTLVSWIV HNGIWAVLVA SGVFALPFIA IIVQEWLKAR AEGADEGNKG
VLSAARIENR VFVAIVVVMF AGIPFIDVDL NTIRYDSSRS AQCQVSVPQP TDTGWSQSFS
TINNQSAKVP VWWAFMHTLS RAVTGASVAA IPCGTDLRQM RMEIDATRID NPVLAQEVAD
FSRDCYGPAR AKLFMQRPNL DEAQMHDVTW IGSRFFTDTG GYYDTYRSST PRDDWPYDSN
RDAGLAQVAS GGGYPSCRQW WADGSNGLRA RLLGQVNPSL LNRLAGWAGF LTRADVDDSV
IRTIASPRQQ KLNQGSVYTD YGGQIDKTLP NIVTRATGDV GMAFGAIAAF PAMDVVRQAL
PMVLALLKMA LVICIPLVLV VGTYDLKTVV TVSVVQFALF FVDFWFQLAR WIDSTILDAL
YGWGFGWNRP HSNFDPLVGL NNAFGDMLLM FVTGTMFIVL PTFWIMALAW AGVRAGNVLQ
GLAGATGDAK AAGGKGGSTA ISAVPKK
|
|---|
| |