Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3784 |
Symbol | |
ID | 5749367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 4162413 |
End bp | 4163081 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641298883 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001564801 |
Protein GI | 160899219 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.142846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.227758 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGACCG ACCGACGCGC CTCGTTTGAC ACTGTCCATG CCACGGCACA GGAAGAGGCC TACCAACACA TCAAGCGCGG CATACGCACG GGCGAACTGC GCCCGGGCAT GCGGCTGGCA CCGGATGACA TCGCGGCCGA AATTGGCACC AGCCGCATGC CCGTGCGCGA GGCGCTGAAC CGCCTTGCCA CGGAAGGGCT GATCGTCAAC CGCCCCAACC GTGGCTCGGT GGTCCGGGTG CTGACCGAAA AAGAGGTGCG CGAGGTGTTC GCCATGCGTT CGGTGCTGGA GGGCCTGGCA GCCACCCTGG CGGCCGAGAA CGTGACCACC AATGACATCC ACGATCTGGA GCAGTTGCTG CAGCGCATGC ACCGCAGCGG CCTGAATGCA TCGGAATGGA TCACGGCGCA CCGCCAGTTC CACGAGCGCC TGTGCACCAT TGCCGACGCT CCCCAGCTGA TGCGGCAGAT CGCGTCCCTG CACTCAGTCT CCGAGCCCCT GATGCGGGTG TGGCTGGAGG GCAAGCCATC GACGGACTAC GTGCACGACA GGCACGAAGA ACTCATAGGC GCATTGAAGG CCAGGGATGG CGCAAAGGTG GAGGCCCTGA TGCGCGCCCA CATCCTGCGC ACGCTTCCAG GCATCCTCCA GGCGAACCAG GCCGACTGA
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Protein sequence | MLTDRRASFD TVHATAQEEA YQHIKRGIRT GELRPGMRLA PDDIAAEIGT SRMPVREALN RLATEGLIVN RPNRGSVVRV LTEKEVREVF AMRSVLEGLA ATLAAENVTT NDIHDLEQLL QRMHRSGLNA SEWITAHRQF HERLCTIADA PQLMRQIASL HSVSEPLMRV WLEGKPSTDY VHDRHEELIG ALKARDGAKV EALMRAHILR TLPGILQANQ AD
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