Gene Daci_3784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3784 
Symbol 
ID5749367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4162413 
End bp4163081 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content65% 
IMG OID641298883 
ProductGntR family transcriptional regulator 
Protein accessionYP_001564801 
Protein GI160899219 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.142846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.227758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCG ACCGACGCGC CTCGTTTGAC ACTGTCCATG CCACGGCACA GGAAGAGGCC 
TACCAACACA TCAAGCGCGG CATACGCACG GGCGAACTGC GCCCGGGCAT GCGGCTGGCA
CCGGATGACA TCGCGGCCGA AATTGGCACC AGCCGCATGC CCGTGCGCGA GGCGCTGAAC
CGCCTTGCCA CGGAAGGGCT GATCGTCAAC CGCCCCAACC GTGGCTCGGT GGTCCGGGTG
CTGACCGAAA AAGAGGTGCG CGAGGTGTTC GCCATGCGTT CGGTGCTGGA GGGCCTGGCA
GCCACCCTGG CGGCCGAGAA CGTGACCACC AATGACATCC ACGATCTGGA GCAGTTGCTG
CAGCGCATGC ACCGCAGCGG CCTGAATGCA TCGGAATGGA TCACGGCGCA CCGCCAGTTC
CACGAGCGCC TGTGCACCAT TGCCGACGCT CCCCAGCTGA TGCGGCAGAT CGCGTCCCTG
CACTCAGTCT CCGAGCCCCT GATGCGGGTG TGGCTGGAGG GCAAGCCATC GACGGACTAC
GTGCACGACA GGCACGAAGA ACTCATAGGC GCATTGAAGG CCAGGGATGG CGCAAAGGTG
GAGGCCCTGA TGCGCGCCCA CATCCTGCGC ACGCTTCCAG GCATCCTCCA GGCGAACCAG
GCCGACTGA
 
Protein sequence
MLTDRRASFD TVHATAQEEA YQHIKRGIRT GELRPGMRLA PDDIAAEIGT SRMPVREALN 
RLATEGLIVN RPNRGSVVRV LTEKEVREVF AMRSVLEGLA ATLAAENVTT NDIHDLEQLL
QRMHRSGLNA SEWITAHRQF HERLCTIADA PQLMRQIASL HSVSEPLMRV WLEGKPSTDY
VHDRHEELIG ALKARDGAKV EALMRAHILR TLPGILQANQ AD