Gene Daci_3776 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3776 
Symbol 
ID5749359 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4152416 
End bp4153258 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content72% 
IMG OID641298875 
Producthypothetical protein 
Protein accessionYP_001564793 
Protein GI160899211 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.892211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.779131 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACAAGC TCTCTCCCGC GCCCGGGCCA GTGCCCGGAC GTGACGCCGT CGCGGGCTTG 
CGGCGGCTGG GGCCCTTGCA GTGGCTGGGC CTGATCACTG GCGCCGTGCT GCTGGGCGAT
GCCGTGGTGC TGATGGCGCG CGGCATGTTC AATCTGGGCG TGACGCTGCC AGCGGTGCTG
GGCCTGCTGT TCATGGCCTG CAGCCTCTGG CGCTCGGCCA TTGCGCGCAG GCTGCGCGCC
AGTGCCTGGC TGCGGCGCGC CTGGTGGCTG GGCTGGGCGG CGTTGGCGAT GTGGCTGGTC
AGCCTGCTGG TGTTCTGGGC GCACCTGCTG TCCGCCTCGT CCGGGTTGCC ACCGGACCAG
CCGGTGCAGG CCATCGTGGT GCTGGGCAGT GCCACGCGTG ACGGCCAGCC GTCGCTCACG
CTGGCCCAGC GGCTGGACCG CGCTGCCGAG CTGGCCGCCC GCCAGCCCAA GGCGCTGGTG
CTCACCAGCG GCGGGGTGGA CTTTGGGGAA AGCGAGAGCG AGGGCGCCAT CATGGCGCGC
TATCTGCAGC AGCGCCACGG CCTGCCACCC GAGCGCCTGC TGATGGAGGA GCGCAGCACC
AGCACGGCGC TGAACCTGGC CTGGAGCCTG CCCCTGCTGC AGGCGCGCGG GGTGGAGCCG
CAGGCGGCAA TCGCCATCGT CACCAGCGAC TTCCACACCC TGCGCGCCGG CTGGATAGCC
GAGCGCAGCG GCTACGGCCA GGCCTTCACC GTGGGTGCGC CCACGCCCGT GACGATCCGC
GCCAACGCCT GGCTGCGCGA GTACTTTGCG GTGATCAGCG GCTGGGTGCT GGGGGAGTTC
TGA
 
Protein sequence
MHKLSPAPGP VPGRDAVAGL RRLGPLQWLG LITGAVLLGD AVVLMARGMF NLGVTLPAVL 
GLLFMACSLW RSAIARRLRA SAWLRRAWWL GWAALAMWLV SLLVFWAHLL SASSGLPPDQ
PVQAIVVLGS ATRDGQPSLT LAQRLDRAAE LAARQPKALV LTSGGVDFGE SESEGAIMAR
YLQQRHGLPP ERLLMEERST STALNLAWSL PLLQARGVEP QAAIAIVTSD FHTLRAGWIA
ERSGYGQAFT VGAPTPVTIR ANAWLREYFA VISGWVLGEF