Gene Daci_3716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3716 
Symbol 
ID5749299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp4083534 
End bp4083902 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content64% 
IMG OID641298815 
Productantibiotic biosynthesis monooxygenase 
Protein accessionYP_001564733 
Protein GI160899151 
COG category[R] General function prediction only 
COG ID[COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.493446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.00435102 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTGTCG TACTGTTCGA ACTGCAGGCC TTGCCCGGCC AGAACCAGAC CTATGTGGAC 
CTGGTCAACA AGCTCACCCC CATGCTCAAG CCCATGGAGG GGTTCATCTC CGTGGAGTGC
TTCCAGAGCA CGCTCAACCC CGAGAAAGTC ATGTCCGTCA CCACCTGGCG CGACGAGGAA
GCCGTCGTCC AGTGGCGCAA CGTGGAAGCC CACCTCAGTG CCCAGCGCGC CGGCCGCGAC
AAGATCTTCA AGGACTACCG CGTGCGCGTC ACCCAGGTGC TGCGCGACTA CGGCCTGAAT
GACCGCGCGC AGGCGCCTGC GGACAGCATC ATGGGCAAGG CGGGCAGCTG CCCCGTCAGC
CATGCCTGA
 
Protein sequence
MVVVLFELQA LPGQNQTYVD LVNKLTPMLK PMEGFISVEC FQSTLNPEKV MSVTTWRDEE 
AVVQWRNVEA HLSAQRAGRD KIFKDYRVRV TQVLRDYGLN DRAQAPADSI MGKAGSCPVS
HA