| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3662 |
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| Symbol | |
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| ID | 5749245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 4021103 |
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| End bp | 4023496 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298761 |
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| Product | Ig family protein |
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| Protein accession | YP_001564679 |
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| Protein GI | 160899097 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4934] Predicted protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.413571 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.157157 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCCT GCCGCACGAT TCGCTTGAAC CTTTTCCTCG CACCACCGCG CTGGTGGGCC
ATCACGGCGC TGTGCGCAGC AGCCCTTTCA GCCTGCGGAG GGGGAAGCGA TACGGCAGCC
CCCTCCCAAG CGGTGGCCGG CCCGCTGGCC TCCGGCACGA CGACCCTCGA GAACCTCGTG
GTGCTGGACG ACACCGTAGG CTCGGCCGTA GCGCAGCCGC AGTTCCACAT TGCCCCGGTA
TTTGTGGAGC CGCCACAGGG GCCGGGCGTC GCAGTTGCAG GCGACGGGGC GCAGCTGCCG
CCTGTGGCCA GCATCCTGCC GCCTCAAACC AGATCGCTGT CCACCCGCAG GCTCACCCCC
GATGAATTGC TGGCAGCCCA GCGCGGACAG CCGTCCATGG AGATCACCTC CCAGCAGGGC
ACGCCCACGC CCTTGGCCTC TGGCTCCATC GTGACCTATA CCCCGGCGCA AGTACGAGCA
GCCTATGGCT TTCCCGGGCT GGCACCGTAC GGCAGCCCGC TCACACCGGC ACAGGCAGCG
CAGATGGGCG CAGGTCAGAC CATCTACGTC GTCAATGCCT ACCACAACCC CAACGTCGCG
ACCGAACTGG CCACCTTCAA CCAGCGCTTC GGCCTGCCCA ACTGTACTGG CCGCATATTG
GCGCCCGCTG CCCCGCTGCC CATGCCCGCG GCGTCCTCGA CAGGCTGCGA GCTGCTGGTC
GCGTACAGCG ACACGTCGGG CCAGTTGGCG GCACGCGCAC CGGCCTACAA CGCGGGCTGG
GCCACCGAGA TCGCGCTGGA TGTGCAGTGG TCGCACGCCA TCGCACCGCT TGCACGCATC
GTGCTGATCG AGGCGCCTGA CGCATCGACC AACAGCCTGC TGCGTGCCGT GCAACTGGCC
AATGCCATGG GCCCTGGTGT ACTTTCCATG AGCTTCGGCA CGGCCGAGGG CAGCTGGACC
ACCTCCGTGG ACTCCGTGTT CGGCGCCAGC CAGATGACCT ACCTGGCTGC CACCGGCGAC
TGGGGCGCGG GCGTGTTGTG GCCTTCAGTC TCCTCCAAGG TGCTCGCCGT GGGAGGCACT
TCGCTGAGCT ACTCCGGAGC AGGCAGCCGA TCTGAGGTGG CCTGGTCGGG CACGGGAGGC
GGCATCAGCG CCTATGTACC CGCATCGGCC TACCAACAAA GCGGCGTGCC GGGCGTGGGC
GGGCTGAGTC GCCGCACCGT GGCCGACGTG GCAATGAACG CGGATCCGTC CACCGGGCAC
TATCTGGCCG TCATCCCCTC GGGCGGCACG GCCGTGCAGT GGGTCAGCGC AGGCGGCACC
AGCCTGTCTT CCCCGATGTG GGCTGGACTG GTCGCCGTAG CCAACGCCAT GCGAGCCCAA
TCTGCGCTGG CGCCTCTGGG CAGCACCCAA CCCATGCTGT ACGGCAAAGT GGCAGCAACA
CCCACCAGCT ACTCCAGGGC ATTCGCCGAC ATCACCAGCG GCTCGCATGG CAGTTGCGCC
ACCTGTTCTG CGCGTGCAGG CTTTGACGAA CTCACCGGCC TTGGCACGCC CAATGCCACG
GATCTGCTCA GCGCACTGGG CGCCGCCACA CCCGCTGCGG TGGCACCGGT CGTGGCTGCG
GCCACCATTT CGGGCGATGC CGGCAAGGCC CTGAGCTTCA CCGTGTCGGC CACAGGCAGC
AACCCGCTGA GCTACAGCCT GGCAAGCGCA CCAGCGGGAA TGGCGGTCGC AGCCGCGACG
GGAATCGTCA CCTGGACAGC CCCCGTGGCG GGAAGCTACG CCATCACGGC CCGGGCCACG
GACACGAAAA CAGGCCTGAC CGGGCAGGCG GCCTATACGG TCAGGATCGC ACCGGCCCAG
CCTCCCGTGG TCACCGGAGC CAGCATCAGC GGTACGGCCA ACGTGGCGCT GTCGTTCAGC
GCCGCCGCAA CCGCGCCCCA CCCCGTCAGC TACAGCCTGG TCTCCGCGCC CTCCGGCATG
GTCATCAGCA CCACCGGCCT GGTGAGCTGG CCCAAGCCCG TGGCAGGTAA CTACAGCGTT
ACGGTGGTGG CCCGGGACAC GGCGACCGGA CTGAGCGGCA GCGCCGTCTT CACGGTGAAG
GTGGCCCCCG CCGGTACAGC AGGCGCCGAC CTGGCCATCA CCGCCGCCGC CGTGCAGGGC
AAGGCAGGCG TCCCCCTGTC CGCAACGATC AGCGTGTCGG CGCCTGGCGC GACCTCCGTG
TCAGTGTCCC TCTCCGGCGT GCCGCTGGGC ATGGTGTTCA CGGCCCAGGG CTCCGCGATC
AGCATGCGGT GGGCCCAGCC GGTGGCCGGC AGCTATGCGC TGCTGGTGGT GGCACGTGAT
TCCCTGGGCC GCAGCGCCCA GGCAACGATG CCCGTCACCA TCACGGCGCC TTGA
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| Protein sequence | MAPCRTIRLN LFLAPPRWWA ITALCAAALS ACGGGSDTAA PSQAVAGPLA SGTTTLENLV
VLDDTVGSAV AQPQFHIAPV FVEPPQGPGV AVAGDGAQLP PVASILPPQT RSLSTRRLTP
DELLAAQRGQ PSMEITSQQG TPTPLASGSI VTYTPAQVRA AYGFPGLAPY GSPLTPAQAA
QMGAGQTIYV VNAYHNPNVA TELATFNQRF GLPNCTGRIL APAAPLPMPA ASSTGCELLV
AYSDTSGQLA ARAPAYNAGW ATEIALDVQW SHAIAPLARI VLIEAPDAST NSLLRAVQLA
NAMGPGVLSM SFGTAEGSWT TSVDSVFGAS QMTYLAATGD WGAGVLWPSV SSKVLAVGGT
SLSYSGAGSR SEVAWSGTGG GISAYVPASA YQQSGVPGVG GLSRRTVADV AMNADPSTGH
YLAVIPSGGT AVQWVSAGGT SLSSPMWAGL VAVANAMRAQ SALAPLGSTQ PMLYGKVAAT
PTSYSRAFAD ITSGSHGSCA TCSARAGFDE LTGLGTPNAT DLLSALGAAT PAAVAPVVAA
ATISGDAGKA LSFTVSATGS NPLSYSLASA PAGMAVAAAT GIVTWTAPVA GSYAITARAT
DTKTGLTGQA AYTVRIAPAQ PPVVTGASIS GTANVALSFS AAATAPHPVS YSLVSAPSGM
VISTTGLVSW PKPVAGNYSV TVVARDTATG LSGSAVFTVK VAPAGTAGAD LAITAAAVQG
KAGVPLSATI SVSAPGATSV SVSLSGVPLG MVFTAQGSAI SMRWAQPVAG SYALLVVARD
SLGRSAQATM PVTITAP
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