| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3638 |
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| Symbol | |
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| ID | 5749221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3996174 |
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| End bp | 3997322 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641298737 |
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| Product | branched chain amino acid ABC transporter periplasmic ligand-binding protein |
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| Protein accession | YP_001564655 |
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| Protein GI | 160899073 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.13399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.0727576 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACC CCGTCAGAGT CGGCATTCTT TACTCGGCCA CCGGCACCAC ATCGACCATC
GGCCAGTCCC AGCTGCAGGG CGCGCAACTG GCCATCGACG AAATCAACGA GACGGGCGGT
CTGCTGGGGC GTGAACTGGT CGCCGTGCGC TACGACCCGG CCTCCACGCC GGCCCGCTAT
GCGGCCCTGG CCGAGCAACT CATCGTGCGC GACGGCATCA ACGTCATCTT CGGCTGCTAC
ATGTCCAGCA GCCGCAAGGC GGTCATCCCC ATCGTCGAGA AATGGAACAA GCTGCTGTTC
TATCCCACGC TCTACGAAGG CTTCGAGTTT TCGGGCAATG TCATCTACAC GGGCGCCGCG
CCCAACCAGA ACAGCGTGCA ACTGGCCGAC TACATGACCA GCAGCTTCGG CGCGCGGGTC
TACCTCATCG GCTCGGACTA CATCTACCCC TACGAGTCCA ACCGCATCAT GGGCGAGCTG
GTCATGCAGC ACCCGGGCAG CGACAAGCTC GGTGAACACT ACCTGCCTCT GGACGCCACC
GAGCGCGACT ACGCGGCCAT CATGCAGGAC ATCCGCGCCA GGCAGCCGGA CTTCATCTTC
TCCACCGTGG TCGGCGACTC CACGGCCAGC CTCTACCGCG CCTATGCCGA TGCGGGCTTC
AACCCGCAGA CCATGCCGAT TGCCAGCCTC ACCACCTCCG AGGCCGAGAT CGCCCAGATG
GGCGCCGATG TGGCGGCCGG CCACTTCACG GCCGCGCCCT ACTTCCAGTC CATCGATTCG
CCCGCCAACG CGCGCTGCCT GGCCCGGCTG CGCCAGCGCC TGGGCGACGA CTGCCGGCCC
AACCTGTGCT GGGAGGCCGC CTACTTTCAG ATGCACCTGT TCGCCAACGC CTTCCGCCAG
GCCGGCAGTG ACCGCATAGG CGAGCTGCTG CCCCATCTGC TGGGCAGCGA ATTCGACGCG
CCCCAGGGCC GCATCAGGCT GGACCCCGAC AACCACCACA CCTGGCTGCA CCCGCGCGTG
GGCCGCGCCA ACGCACAGGG CGGCTTCACC ATCGTGCGCC AGGCCACCCG GGCCGTCTCG
CCCGACCCCT ACCTGGTCAC CCACTCCCTG GGCGACTGGA CCGCCAGCCT CGGTGCCCTG
GAGAACTGA
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| Protein sequence | MNDPVRVGIL YSATGTTSTI GQSQLQGAQL AIDEINETGG LLGRELVAVR YDPASTPARY
AALAEQLIVR DGINVIFGCY MSSSRKAVIP IVEKWNKLLF YPTLYEGFEF SGNVIYTGAA
PNQNSVQLAD YMTSSFGARV YLIGSDYIYP YESNRIMGEL VMQHPGSDKL GEHYLPLDAT
ERDYAAIMQD IRARQPDFIF STVVGDSTAS LYRAYADAGF NPQTMPIASL TTSEAEIAQM
GADVAAGHFT AAPYFQSIDS PANARCLARL RQRLGDDCRP NLCWEAAYFQ MHLFANAFRQ
AGSDRIGELL PHLLGSEFDA PQGRIRLDPD NHHTWLHPRV GRANAQGGFT IVRQATRAVS
PDPYLVTHSL GDWTASLGAL EN
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