Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3637 |
Symbol | |
ID | 5749220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3995482 |
End bp | 3996171 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641298736 |
Product | response regulator receiver/ANTAR domain-containing protein |
Protein accession | YP_001564654 |
Protein GI | 160899072 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3707] Response regulator with putative antiterminator output domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0573839 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.0644959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATGCCG CCCCGAACAA GGACGCAGGC AGCGCTGCCA CAGGCCGGCC GCTGCTGGAA AGAAAACCGC TGCTGCGTGC CACCTCGCCC CAACTGAAGG AACTGCGCCA GCTGCGCATT GCCGTCGTCC ACCCCGACGA CGCGGACGGC CGCCTGCTGG CCCAGCAGCT GCAGCGCATA GGCTGCCAGG TCCAGGCCAT CTGGCCGCCC CAGCCCAGCC TGCCCGAGGG TACGGACGTG GTCTTCCTGG CCGTGCGCCC CGATCACCTG CAGTTGAACT ACGCCTGGAC CCAGGGCGAG GGGGAGAGCC CGCCCACCGC CATCGCCGTG GTCAACTACG AGAACCCCAC CATCGTCTCC GCCGTGCTGG AACTGCAGGT GCAGGCCATC CTGCCCTCGC CCATCCGCTC CTTCGGCCTG CTGTCCACAT TGGTGCTGGC GCGCAGAAAC CACAAGGAAT CACGCCAGCA GCAGCAGCGC ATCGCCAAGC TCCAGGCCAA GCTGCTGGGC CAGCGCCGCG TGGCCGAAGC CAAGGCCATC CTCATGCAAA CCCACCAGAT CAACGAAGAC CAGGCCTACG AAATGATCCG CGCCCAGGCC ATGAGCCGGC GAAGCTCGGT GGAGGAGATT GCCCAGGCCA TCGTGCATGC GAGCGAAATA CTGTCGCTGG GCAAGGGCGT GGGCAGGTAA
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Protein sequence | MDAAPNKDAG SAATGRPLLE RKPLLRATSP QLKELRQLRI AVVHPDDADG RLLAQQLQRI GCQVQAIWPP QPSLPEGTDV VFLAVRPDHL QLNYAWTQGE GESPPTAIAV VNYENPTIVS AVLELQVQAI LPSPIRSFGL LSTLVLARRN HKESRQQQQR IAKLQAKLLG QRRVAEAKAI LMQTHQINED QAYEMIRAQA MSRRSSVEEI AQAIVHASEI LSLGKGVGR
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