Gene Daci_3561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3561 
Symbol 
ID5749145 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3909618 
End bp3910175 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content65% 
IMG OID641298662 
Producthypothetical protein 
Protein accessionYP_001564580 
Protein GI160898998 
COG category[R] General function prediction only 
COG ID[COG0645] Predicted kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.248722 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0187655 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTTT CCGAACAGTC CCGGCCCCGT TGCGCAGAAT ATGCCGATGC CCCTGCCGCC 
AACGCGCGGC TTGCCACGCT GCACATGGTC TGCGGCAAGA TCGGCTCGGG CAAGTCAACG
CTGGCGCGGC AATTGGCGGC CGAGCCCGGA ACGGTGTTGG TCAGCGAGGA TTCCTGGCTG
GCCGGCCTGT ACCCCGGCGA GATGCAGTCG GTGGCCGATT ACGTGCGTTG CAGCACGCGG
CTCAAGGGGT TGATGGGGGC GCATGTACAG GCGCTGCTGG ACGCTGGTGT GTCGGTGGTG
CTGGATTTTC CGGCCAATAC CCTGGAGGGG CGGGGCTGGG CGCGCAGCGT GTTCAAGAAA
GTGGGCGCCT CGCACCGCCT GCATTTTCTG GATGTGCCTG ACGAGGTCTG CAAGCAGCGC
TTGCGTGTGC GCAATGCGGC AGGCGAGCAT CCGTTTCAGG CCAGCGATGA GCAATTCGAC
CTGATCACTA GCTACTTTGT CGCGCCCTCC GACGAGGAGG GCTTCGACGT GGTGCGTCAC
CCGTACGCGC CTGTCTGA
 
Protein sequence
MQVSEQSRPR CAEYADAPAA NARLATLHMV CGKIGSGKST LARQLAAEPG TVLVSEDSWL 
AGLYPGEMQS VADYVRCSTR LKGLMGAHVQ ALLDAGVSVV LDFPANTLEG RGWARSVFKK
VGASHRLHFL DVPDEVCKQR LRVRNAAGEH PFQASDEQFD LITSYFVAPS DEEGFDVVRH
PYAPV