Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_3518 |
Symbol | upp |
ID | 5749103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3863925 |
End bp | 3864554 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641298621 |
Product | uracil phosphoribosyltransferase |
Protein accession | YP_001564539 |
Protein GI | 160898957 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0035] Uracil phosphoribosyltransferase |
TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000866568 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.165207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTACTC TGCACCTGAT CGACCACCCG CTGGTCCAAC ACAAGCTCAC GCTGATGCGC CGCAAGGAAG CCAGCACCAA CAGCTTTCGC CGCATGCTGG GCGAGCTGTC CACGCTGATG GCCTACGAGA TCACGCGCGA CATGCCGCTG CAGGACATCG AGATCGAGAC CCCGCTGGAG ACCATGACCG GCAAGGTCAT CGACGGCAAG AAGCTGGTGC TGGTGTCCAT CCTGCGCGCC GGCAACGGTT TCCTCGACGG CATGCTCAAC GTCGTGCCCG GCGCGCGCAT CGGCCACATC GGCCTGTACC GCGACCCCGA GACGCTGCAG CCCGTCGAGT ACTACTTCAA GATGCCCTCC GAGATGGAAG AGCGCGACGT GCTGGTCGTC GATCCCATGC TGGCCACGGG CAACTCGGCC GCCGCCGCCG TGGCGCGCCT CAAGCAGCTG AACCCGAAGT CCATCAAGTT CATGTGCCTG CTGGCCGCGC CCGAAGGCGT GGCCACCATG CAAAAGGCCC ATCCCGACGT GGACATCTAC ACGGCCGCCG TGGACCGCCA GCTCGACGCC CACGGCTACA TCCTGCCGGG CCTGGGCGAC GCGGGCGACC GCATCTTCGG CACCAAGTAG
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Protein sequence | MSTLHLIDHP LVQHKLTLMR RKEASTNSFR RMLGELSTLM AYEITRDMPL QDIEIETPLE TMTGKVIDGK KLVLVSILRA GNGFLDGMLN VVPGARIGHI GLYRDPETLQ PVEYYFKMPS EMEERDVLVV DPMLATGNSA AAAVARLKQL NPKSIKFMCL LAAPEGVATM QKAHPDVDIY TAAVDRQLDA HGYILPGLGD AGDRIFGTK
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