Gene Daci_3384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3384 
Symbol 
ID5748969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3721597 
End bp3722601 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content72% 
IMG OID641298488 
Productalpha/beta hydrolase domain-containing protein 
Protein accessionYP_001564407 
Protein GI160898825 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.10878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.17727 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCCTGA ACGTGCCCCA GACTGAATCC TCCTCCCATG CCACGCCGCT GCCGGCGTCC 
CTGACCCACC AGATGCGCGA TGTGCTGCGC CGCATGGAGC GCGCCGCGCG CACGCCCCTG
CACCAGCTGG GCGCCGAGGG CGCACGTGCC GCCTACGAGG CGGGGGCCGG CGTGCTCGAA
ATTCCCAAGC CGGTTCTGCC GCGTGTCGAT GATCTGCAGA TTCCTGCGCG CGATGGCGCC
TTGCTGCCTG CGCGTCTCTA TGCGCCCGTG GAGCGCAGCC AGGCGCCGGC CACGGGCCTG
CCCGTGCTGC TGTACCTGCA CGGCGGCGGC TTCACCGTGG GCAGCGTGGC CACGCACGAT
GTACTGTGCC GCCAGCTGGC CCATCTGTCG GGCGCCATGG TGGTCTCGCT GGACTACCGG
CGCGCGCCAG AGCACAAGTT TCCCACCGCC CACGACGACG CCTGGGACGC GCTGCAGTGG
CTGGCCGCGC AGGCGGCCTC GCTGGGCGCC GACCCTGCGC GCCTGGCCGT TGGCGGCGAC
AGCGCGGGCG GCACGCTGGC CGCAGCCTGC GCCATCCATG CGCGCGACAC CGGCCTCAAG
CTGGCCCTGC AACTGCTGAT CTACCCGGGC ACGACGGCGA ACCAGGACAC CGACTCGCAC
CGCCGCTTCG CCCACGGGCT GGTGATCGAC GAGCCGGCCA TCACCTGGTT CTTCGCCCAG
TACCTCAACA GCCCCGCCGA CCGCGAGGAC TGGCGCTTTG CCCCGCTGCT GGCCCCCGAT
GTGGACGGCG TGGCCCCGGC CTGGATAGGC CTGGCCGAAT GCGACCCGCT GGTGGACGAG
GGCGTGGAAT ACGCCGACAA GCTGCGCATG TCCGGCGTGC CCGTGGACCT GGAGATCTAC
CGGGGCGTGA CCCATGAATT CGTCAAGATG GGCCGCGCCA TTGCCGAAGC GCGCCGTGCA
CATGCCGACA TGGCGCGCGC CTTGAGCGAC GCCTTCGCGG CCTGA
 
Protein sequence
MLLNVPQTES SSHATPLPAS LTHQMRDVLR RMERAARTPL HQLGAEGARA AYEAGAGVLE 
IPKPVLPRVD DLQIPARDGA LLPARLYAPV ERSQAPATGL PVLLYLHGGG FTVGSVATHD
VLCRQLAHLS GAMVVSLDYR RAPEHKFPTA HDDAWDALQW LAAQAASLGA DPARLAVGGD
SAGGTLAAAC AIHARDTGLK LALQLLIYPG TTANQDTDSH RRFAHGLVID EPAITWFFAQ
YLNSPADRED WRFAPLLAPD VDGVAPAWIG LAECDPLVDE GVEYADKLRM SGVPVDLEIY
RGVTHEFVKM GRAIAEARRA HADMARALSD AFAA