| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3326 |
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| Symbol | |
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| ID | 5748911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3648022 |
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| End bp | 3649356 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641298430 |
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| Product | anti-FecI sigma factor, FecR |
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| Protein accession | YP_001564349 |
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| Protein GI | 160898767 |
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| COG category | [K] Transcription
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
[COG3712] Fe2+-dicitrate sensor, membrane component |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.468182 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.167582 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACCC CCTCCGCTTC CTGGACCGCT GCGCGCTGGC ACCAGCTTTT CTGTGCCTGC
CAGCAGCAAC TGGTGGCCTA TCTGGCCGGC AAGACCGGCA GCCGTGACGA GGCGCAGGAA
CTGGCCCAGG AAACCTGGCT GCGCCTGGCC GATGCGCCGC CGCAGCTGCC CGATGGCAGC
TCGCCCACGC TCGAAGCCGC GCGGGCCTAC CTGTTTGCCA CGGCCAAGCA TCTGGCGATA
GATAGGCTGC GTCAGCGCGG TGCGCAGCAG CGCTGCATGG ACGACTGGGC GCAATTGCAG
CCCGAGGCCG AAGGCGATGT GGCTGACCGC GCCATGTACC GGCAGGCACT GGCCGTGGTG
GAGCGCACGA TTGCAGACCT GCCCGAGCGC ATGCAGGCCG CCTTGCTGGC CCACCGCCTG
CATGGCGAGC GGCAGGCCGA CATCGCCGAC CGCCTGCAGG TCTCCCTGAA CACCGTGGAG
CGCGACCTGA TGCAGGCCGA TGCCTGCCTG GAAGCCGCCT TGCTGCGCTG GCGCGGCGGG
GTGGAGGCGG GCTTGCAGGC CTCCTCCAGA AAGCGGCGGC GGCGTGCCCT GGGCGCACTG
CTGGGCGTGG CCGGCATGGC CTGCGCGGCC TGGCCCGCCT GGCAGATGTG GAGCCGCCGC
GTGCTGTGGC AAGGTGAACT GGCCAGCGCC ACGGGCGTGC AGCGCAGCCT GGAGCTGCCC
GATGGCAGCG TGCTGCGCGT GGACGCCGCC AGCCGCGTGG CGCTGACCTA CCGTGCCGAC
CTGCGACAGG CACAGCTGCT GGAAGGCGCC GCCTTCTTTG CCGTGGCGCG CGATGCGGCA
CGGCCCTTTG TGGTGGAGGC TGGCCCCCTG CGCGTGACCG TGCTGGGCAC GCGCTTTGGC
GTGGAACTGG AGCCCGATGC GGTGCGCGTG CAGGTGGAGT CGGGCCAGGT GCGGGTGGAG
CATGCGGCCA CCGGACGCAG CCAGTTGCTG CAGGACAGCC AGTCGCTGCG CATTCCCCTG
GACGGCGGCG AAGGAGATGC CGAGGGCGCT GCCTGGCAGC CGCAGCTCCA GCAACGGCCT
GCGGCCTGGC GCGAGGGCGA ACTGGTCTTC GAGCAGGAAC CGCTGGGCCG CGTCGTGCAC
CGTCTGGGCC GCTACACGCG GCGCCGCCTG GTGGTGGAGG AGGGCGCGGC GCAACTGGCC
ATCAGCGGCC ATGTGCGCAT TGCCCAGGCC GAGCGATGGT TGCGCGGGCT GCCGCAGTTC
GCCCCGGTGC AGGTCAGCGT GCTGGACGAC GGCGGCCTGC GGATTGCGCG GCGCGGCGGG
CGCGCGGAGC CGTGA
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| Protein sequence | MPTPSASWTA ARWHQLFCAC QQQLVAYLAG KTGSRDEAQE LAQETWLRLA DAPPQLPDGS
SPTLEAARAY LFATAKHLAI DRLRQRGAQQ RCMDDWAQLQ PEAEGDVADR AMYRQALAVV
ERTIADLPER MQAALLAHRL HGERQADIAD RLQVSLNTVE RDLMQADACL EAALLRWRGG
VEAGLQASSR KRRRRALGAL LGVAGMACAA WPAWQMWSRR VLWQGELASA TGVQRSLELP
DGSVLRVDAA SRVALTYRAD LRQAQLLEGA AFFAVARDAA RPFVVEAGPL RVTVLGTRFG
VELEPDAVRV QVESGQVRVE HAATGRSQLL QDSQSLRIPL DGGEGDAEGA AWQPQLQQRP
AAWREGELVF EQEPLGRVVH RLGRYTRRRL VVEEGAAQLA ISGHVRIAQA ERWLRGLPQF
APVQVSVLDD GGLRIARRGG RAEP
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