Gene Daci_3221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3221 
Symbol 
ID5748805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3536823 
End bp3537536 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID641298324 
Producthypothetical protein 
Protein accessionYP_001564244 
Protein GI160898662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.393793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.185811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAC TGCAAAACAT CGCGCCCGCG CTGACCATGA GCAGCCGGGA GATCGCTGAG 
CTCACCAGCA AGGATCTGGG CCACGTCAAC CGCGACATCC GCGCCATGCT GGACTCGCTC
GAAGATGATC CAGAACTGGA GCATGTCCGC GAGGACAAGG ATGCGCGCGG CTACACCCTC
GCTTTTCATC TCGGCCGCGA GCTGACATAC ACCCTGTTGG CCGGCTACAG CACGCAGCTG
CGCCGCCGCG TGATCGCGCG CTGGCAGGTG CTGGAGGCGG CCCATGCAAA GACGCCGGCT
GAGCTGTCCC GCATGGACAT CCTCCGCCTG GCCATGGAGT CGGAGCAGGC GCGTATCCAA
GCCGAGTCCG AGCGCGACAA GGCCATCGCC ACCAAGGCAG AGATCGGCAG CCGCCGCGAA
GCCACGGCCA TGGCCACTGC ATCGGCCAAG TCCCGCGAGG TGGCCCGCCT GCAGCACGAG
CTGGGCCGCA ACCAACAGCA CGCCACCGTG ATCGCCGTGG AGAAGGCGAC GGGCATGGCC
TTCCCGAAGA ACGCCTACGT GGACCTGCGC CGGGTAACGC AGAAGTACGG CCTGCAGGCG
GTGTCGGTGG TGGACGCGCG CTACGGCTCC GTGAAGGCCT GGCCTGCAGT GGCATGGCGC
GAGTGCCATG GTATCGAGTT GTCGGACCTA TTCCCTGGTC AGGAGCCCGC ATGA
 
Protein sequence
MNALQNIAPA LTMSSREIAE LTSKDLGHVN RDIRAMLDSL EDDPELEHVR EDKDARGYTL 
AFHLGRELTY TLLAGYSTQL RRRVIARWQV LEAAHAKTPA ELSRMDILRL AMESEQARIQ
AESERDKAIA TKAEIGSRRE ATAMATASAK SREVARLQHE LGRNQQHATV IAVEKATGMA
FPKNAYVDLR RVTQKYGLQA VSVVDARYGS VKAWPAVAWR ECHGIELSDL FPGQEPA