| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3111 |
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| Symbol | |
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| ID | 5748695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3427571 |
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| End bp | 3428065 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641298214 |
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| Product | nickel responsive regulator |
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| Protein accession | YP_001564134 |
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| Protein GI | 160898552 |
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| COG category | [K] Transcription |
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| COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
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| TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0944552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTTCCCGC CACCTGTTTC CCCACTTCTG CTGCCCATGG AACGCTTCAC CATCTCCATC
GACGACGACC TGGCCCGTGA TTTCGACGGC TGGATCGCCG CGCGCGGCTA CGACAACCGC
TCCGAGGCCA TCCGCGACGT GCTGCGCGCC CACCTGGCCC AGGTGCGCGA GCGCGAGGAC
GCCGACGGCC TGTGCGTGGC CAACCTGTCC TATGTCTACA ACCACCACGA GCGCGACCTG
TCCGAGCGCC TGGCCAGCCT GCAGCACGAC CACCACGAAC TGCACATGGC CACCACCCAC
GTGCACCTGG ACCACGAGCA ATGCATTGAA ACCGTCATGC TGCGCGGCCC GGCCAGCGCC
GTGCGGCGGT TTGCCGACAC CATCACGGCC GAGCGCGGCG TGCACCATGG CCAGCTCAAC
GTGGTTATGG CGCGCAGGGC AGAGCCTGGT GGGCACGATC ACGCGCACCA CCATCCGCAT
TCGCACGACG ATTGA
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| Protein sequence | MFPPPVSPLL LPMERFTISI DDDLARDFDG WIAARGYDNR SEAIRDVLRA HLAQVRERED
ADGLCVANLS YVYNHHERDL SERLASLQHD HHELHMATTH VHLDHEQCIE TVMLRGPASA
VRRFADTITA ERGVHHGQLN VVMARRAEPG GHDHAHHHPH SHDD
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