| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_3090 |
|---|
| Symbol | |
|---|
| ID | 5748674 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3409778 |
|---|
| End bp | 3410221 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641298193 |
|---|
| Product | transposase IS3/IS911 family protein |
|---|
| Protein accession | YP_001564113 |
|---|
| Protein GI | 160898531 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.234179 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAGA TCGACGCAGA AGTGGTACGG CGCCTGGTCA CGGGTCGCAA GAACGATGGA
CGGGCCGTGT ACGACCCGCA GGCCAAGGCA GAGGTGGTGC GGGCGTGCCT GAAGCCGGGT
GTGTCGGTGG CGCGCATGGC GCTGCAATGC GGCATCAACG CCAACTTGCT GCGCCGCTGG
ATCACCCAGA GCATGGGTGC AGACATGAAG GCAAGTCGGG CCAGCATGCC GACCGTGGCC
ATGGCCAGCA CCAGTGCTTT TGTCCCGCTG CGGCTGGCGG CCCCCGAGGT GTCCTCCGTC
ACCGCTGCGC AGATCAAGGC ACGCCTGCAC GCCCGACTGC CTAATGGGGT GGAGATCGAC
CTCAGCGAAA CAGGCCCAGG CGAGTGGTTG CCCGTCATTG AACTTCTGGG GCGCCTGCCA
TGTTCCGACT CGACGACACG CTGA
|
|---|
| Protein sequence | MSEIDAEVVR RLVTGRKNDG RAVYDPQAKA EVVRACLKPG VSVARMALQC GINANLLRRW
ITQSMGADMK ASRASMPTVA MASTSAFVPL RLAAPEVSSV TAAQIKARLH ARLPNGVEID
LSETGPGEWL PVIELLGRLP CSDSTTR
|
|---|
| |