Gene Daci_2961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2961 
Symbol 
ID5748545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3262338 
End bp3262742 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content65% 
IMG OID641298064 
Product4-oxalocrotonate tautomerase 
Protein accessionYP_001563984 
Protein GI160898402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.858705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTCG TCCACACCTA TCTGCCCCAG TCCACCTCCA CTTCCCAGCG CGATGCCGTC 
GTGCAGGGCA TCCACCAGGC GCTGGTGCAA GGCATCGGCA TGCCCGAGGA CGAGCTGTTC
AACATGGTGC ACCCGTACGC TCCCGGGCAG TTCGCGTTCA GCCGCAGTTT CAACGGGGTG
GCGCGTTCGG ATGCGGTGGT GGTGGTCGAG ATCACCATGC GGCGCGGACG CAGCGACGCG
ATGAAGAAGG CCTTGTATGC GGCCATTGCG CGCAACCTGC ACGAGGGGGC CGGGGTTGCG
CCGGCCGATG TGTTCATCTT CATGCATGAG AACGACTACT CGGACTGGTC CGTGGGCCAT
GGGCGCTTCG CCATGGCACT GGTGCAGCAG ACCGGCGCGC AATGA
 
Protein sequence
MPFVHTYLPQ STSTSQRDAV VQGIHQALVQ GIGMPEDELF NMVHPYAPGQ FAFSRSFNGV 
ARSDAVVVVE ITMRRGRSDA MKKALYAAIA RNLHEGAGVA PADVFIFMHE NDYSDWSVGH
GRFAMALVQQ TGAQ