Gene Daci_2940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2940 
Symbol 
ID5748522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3229873 
End bp3231006 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content73% 
IMG OID641298041 
Productcell morphology protein 
Protein accessionYP_001563963 
Protein GI160898381 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.718454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.659123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCCCA CCGCGCAAGA ACTGCAAACC GACAAAGGAC ACCGGCGCAA CGCCTGGATC 
TGGGGCGCCC TGCTGCTGTC GGGCCTGGCC TGGGGTGGCT GGACGCTGGC CAGCGGGGGA
CCGAAGGCCG GCGAGCTGCA ACTGGCCGCC TGGCTGGATG GCCGCGCGGG CGCGGCGCTG
AACAAGGGCC TGCGCCTGCC TGCTCAGTCC TCGCTGGAAA CCGGCCAGGC CGCGCTGCGC
TACCGCCTGC TGGGCGACAC GGGAGCGCAG GTGGCCCTGG GCTGCCCGCA ATGGATGTTC
TACCGCGACG GCCTGCGGCC CCAGCCCGGC ACGGGCGCCG CGCCCTTCGA GGCGCGCCAG
CGCCTGCTGC GCCACTGGAC CCGGCAGTTG CAGGACAAAG GCATTGCCAC CCTGGTGGTG
GCCGTGCCCG ACAAGTCGCG CATCGAGGCC GCCCATCTGT GCGGCCTGCC CGTGGCACCC
GTGATGCTGC AGCGCCTGGA CCTGTGGCAG CAGCGCCTGC AGGCCGACGG CATTGCCTTC
GCCGATCTGC GCCCCGCCCT GCAGACACAG GAGCAGGCGC AACCCGTTTT CTTTCGCACC
GACGTGCACA TGAATGCCGA GGGCGCACGC GCCGCCGCCC TGGCCGTGGC CCAGGCCGCG
CTGCCGCTGC TGGGCGGGCA GCGCGGCGCC CAGGCCTTCG AGGAAACCGC GCCCGGGCCG
CTGCAGCCGC TGCCCGGCGA CCTGCTGGCC CTGGCCGGCC TGGCCGATGC CCCGGCCGGC
TGGCGCCCAC GGCGCGACCA GGTGCGCCCG CAGACCATCA CCCCCGTGCG CGGCGGCGGC
CTGCTGGACG AGACACCGCC CGTGCAGGTG CTGCTGGCCG GCAGCTCCAA CGGGCTGCGC
AGCAATTTCG CGCCGCAGCT CGGCCGCGCG CTGGGCCAGG AAGTCTGGAA CCTCAGCATG
GACGGCGGCC AGTTCAGCGG CGCCATGGTG GCCGCGCTCA AGCGCCGCGC CTCCTGGCCG
GCCAGCCTGC GGCTGGTGAT CTGGGAGTTC TCGGAAAACA CCTTGTCCCT GCCCCTGACG
GACGATGAAA AAGCGGCGCT CAAGGAGATG GACGCCGCCT CCCCGCCTGC GTGA
 
Protein sequence
MDPTAQELQT DKGHRRNAWI WGALLLSGLA WGGWTLASGG PKAGELQLAA WLDGRAGAAL 
NKGLRLPAQS SLETGQAALR YRLLGDTGAQ VALGCPQWMF YRDGLRPQPG TGAAPFEARQ
RLLRHWTRQL QDKGIATLVV AVPDKSRIEA AHLCGLPVAP VMLQRLDLWQ QRLQADGIAF
ADLRPALQTQ EQAQPVFFRT DVHMNAEGAR AAALAVAQAA LPLLGGQRGA QAFEETAPGP
LQPLPGDLLA LAGLADAPAG WRPRRDQVRP QTITPVRGGG LLDETPPVQV LLAGSSNGLR
SNFAPQLGRA LGQEVWNLSM DGGQFSGAMV AALKRRASWP ASLRLVIWEF SENTLSLPLT
DDEKAALKEM DAASPPA