| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2893 |
|---|
| Symbol | |
|---|
| ID | 5748474 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3174486 |
|---|
| End bp | 3175514 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641297993 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001563916 |
|---|
| Protein GI | 160898334 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.213192 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAGCC GCGACCCGTG TCGCAGCCTG CAGGGTTACC CACGCCTGCG CGCCGCCATG
GCAGCGCAGG CACCAAGAAA CCGTTTCCCC ATGCGTACCA CTTACTTTGA CAACTCCCGC
TTTCCCCTCG CCCTGATCGC CACCGCGCTG CCGCTGCTGC TGGCCGCCTG CGGTGGCGGC
GGAGGCGGTG ACAACAGCCA GCCCACCACA CCCACAGGCC CCCAGGCCGT GGCCCTCGAG
TTCGCCGCCA AGGCCGGCAA CCTGCCCGCC AAATGCGGCA CGCCCATCGC CGGCATGGGA
ACCACCCAGG CCACGGTGGA CCTGCATGAC CTGCGCTTTT ACGTCAGCGG CGTCTCGCTG
ATCAATGACA AGGGCGAGGC CGTGGCCGTC ACCCTGGACG TCAACGACTG GCAGACCAAG
GAGGTGACGC TGATCGACCT GGAGGACGGC ACCGGCGCAT GCGCCGACGC AGGCACGCAG
GCGCAGAACA CGCAGGTCAG GGGCACGGTG CCCGCAGGCA CGTACAAGGG CATCAGGATG
ACCGTGGGCG TGCCCTCCTC GGTCAACCAC ACCGACTATG CCGTCGCGCC CAAGCCGCTC
GATATGCAGG CCCTGGCCTG GTCGTGGCAG GCCGGCCGCA AGTTCGCCCA GATCGAGGTC
AACCCCGTGG GCGGCGTGGC CCGCCCCGCG CCGGCAGCCC CCGGCAAGAC GTTCTACGTG
CACCTGGGCT CCACCGGCTG CACGGGCAAC CCCGTGACCG GCGAGACGGT CAGCTGCGCG
CGTGCGGACC GCATGGATTT CGGGTTCGGC GATTTCAATG CCGGCACCCA GAAGGTGGTG
CTGGACATTG CGCAGCTGCT GCAGGGCTCG AACGTCAAGG AAGACCTGGG CGGCGCCGCC
GGCTGCATGT CCGGGGCCAC CGATCCGGAA TGCGTGCCCA TCTTCAGCGC GCTCAGGATC
GATCTGACCA CGGGCCGCTC CATCAATGAA GGCAGCGGCC AGACCGTGTT CCGTACCGAG
GCCAAGTAA
|
|---|
| Protein sequence | MPSRDPCRSL QGYPRLRAAM AAQAPRNRFP MRTTYFDNSR FPLALIATAL PLLLAACGGG
GGGDNSQPTT PTGPQAVALE FAAKAGNLPA KCGTPIAGMG TTQATVDLHD LRFYVSGVSL
INDKGEAVAV TLDVNDWQTK EVTLIDLEDG TGACADAGTQ AQNTQVRGTV PAGTYKGIRM
TVGVPSSVNH TDYAVAPKPL DMQALAWSWQ AGRKFAQIEV NPVGGVARPA PAAPGKTFYV
HLGSTGCTGN PVTGETVSCA RADRMDFGFG DFNAGTQKVV LDIAQLLQGS NVKEDLGGAA
GCMSGATDPE CVPIFSALRI DLTTGRSINE GSGQTVFRTE AK
|
|---|
| |