| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2869 |
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| Symbol | |
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| ID | 5748447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3146777 |
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| End bp | 3148195 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641297966 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001563892 |
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| Protein GI | 160898310 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0768419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAC CAACCGAACC CCTGCCCCAG GCCGCCGCGC CTGCCGCATC CAGCCCCGGC
GGGCCGCCCA TTGCCGGCAG CCAGCCGTTG TGGCGCACCT TTCTGGTGTT CCTGGGCCCC
ATGGTGCTGG CCAACATCCT GCAATCGCTG TCGGGCACCA TCAACAGCGT CTTCATCGGC
CAGATGCTGG GCGTGCAGGC GCTGGCCGCC GTCGCGGCCT TCTTTCCGGT GATGTTCCTC
TTCATCGCCT TCGTGATCGG CCTGGGCGCG GGCTCCTCGG TGCTGATCGG CCAGGCCTAC
GGCGCGCGCA TGCATGACAA GCTGCGCGCG ATTGCGGGCA CGGCCATGTG CATAGGACTT
CTGTTTGGCG CCATCGTGGC CCTGTTCGGC GGGCTGTTCA CCGAGCCGCT GATGCGGTTG
CTGGGCACGC CGCCCGACAT CATGGAGCAG GCCACGCTGT ACTCGCGCAT CGTTCTGCTG
GGCATGCCGG GGCTGTTCGT GTTCCTGCTG GCCACCTCGC TGCTGCGCGG TGTGGGCGAT
ACGGTCTCGC CCATGCTGGC GCTGCTGATC TCCACGGGCA CGGGCCTGGC CTGCACCCCG
GCGCTGATCG CGGGCTGGGC CGGCCTGCCG CGCCTGGGCG TGGCCAGCGC AGGTGTATCC
ATGATCCTGG GCTTCACCCT GGCGCTGGCC TGGCTGGGCT GGCGGCTGCG CCGCATCGGC
AGCCCGCTGG CGCCCAATGC CGCGCTGTGG AAAGCCATGC GCATTGACCG GACCCTGCTC
AAGAGCATCC TGCGCGTGGG CATTCCCACG GGCGTGCAGA TGATTGCCTC GTCCATGGCC
GGGCTGGTCG TCGTGTCGCT GGTCAACGGC TTCGGCTCCA GCGCCACGGC CGCCTATGGC
GCGGTCAACC AGATCAACTC GTTTGCGCAG TTCCCCGTGA TCTCGGTCGC CATCACGGCC
TCCATCCTCG GAGCCCAGGC CATCGGCGCG GGCCGCAGCG AGCGCCTGGG AGCCATCACG
GCCACGGCCA TCCGCATGAA CCTGGCATTG GGCGCCGCCC TGGCCCTGAT CGGCAGCCTG
TTCGCACGGC CGCTGCTGGG CATGTTCATC ACCGACGAGC AGGTGCTGGT GCTGGCCATC
GAGCTGCTGT ACATCGTGCT GTGGAGCGGC CTGCTGCTGG GCTGCTTCAT CGCCCTGTCG
TCCATCATGC GTGCCAGCGG CGATGTGGTC ATTCCCACGG CCATCACCAT CACGGTGCTC
GCCGTGCTGG AGCTGCCCAT GGCCTGGTGG CTGAGCCGCG GCTTCGGGCT GATGGGGATC
TGGATGGCGC TTCCGCTGTC CTACACCCTG ACGCTGTGCC TGCAGACCGC CTACTACAAG
CTGGTCTGGA AGAAGCGCCC CATCCGCCGC ATGGTGTAA
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| Protein sequence | MTKPTEPLPQ AAAPAASSPG GPPIAGSQPL WRTFLVFLGP MVLANILQSL SGTINSVFIG
QMLGVQALAA VAAFFPVMFL FIAFVIGLGA GSSVLIGQAY GARMHDKLRA IAGTAMCIGL
LFGAIVALFG GLFTEPLMRL LGTPPDIMEQ ATLYSRIVLL GMPGLFVFLL ATSLLRGVGD
TVSPMLALLI STGTGLACTP ALIAGWAGLP RLGVASAGVS MILGFTLALA WLGWRLRRIG
SPLAPNAALW KAMRIDRTLL KSILRVGIPT GVQMIASSMA GLVVVSLVNG FGSSATAAYG
AVNQINSFAQ FPVISVAITA SILGAQAIGA GRSERLGAIT ATAIRMNLAL GAALALIGSL
FARPLLGMFI TDEQVLVLAI ELLYIVLWSG LLLGCFIALS SIMRASGDVV IPTAITITVL
AVLELPMAWW LSRGFGLMGI WMALPLSYTL TLCLQTAYYK LVWKKRPIRR MV
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