Gene Daci_2833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2833 
Symbol 
ID5748409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3108915 
End bp3109943 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content68% 
IMG OID641297928 
Producthypothetical protein 
Protein accessionYP_001563856 
Protein GI160898274 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.226544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.225758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCA AACCCCTCTT TCAGCTGCCG CGGCGCACCG TGCTCTCGCT GGGCACGTCC 
GGTCTTGCCG CCGTGTTGTG CGGCCTCACC CTGGCCCACA CAATCTCCAC GGCCCATGCG
GCCGACGCCT ATCCGAACAA GCCGGTCAAG CTCATCGTGC CGTTTGCAGC AGGCGGCTCC
ACCGACATCG TTGCGCGCGT GATCGCAGAG GGTCTGCGCA GCACGCTGGG CCAGCCCGTG
GTGGTGGACA ACAAGGCCGG CGCTGGCGGC CTGATCGGCA CCGAAAGCAT TGCCCAGGCC
GCGCCTGACG GCTACACCAT CGGCATGGCC ACGGTGAGCA CGGCCACCAT CAATCCCTCG
CTGTACACGC GCGCCGCCAA GCTGGAGGGC AGGCTTTTGC CCGTGGCCAA TCTGGTGACC
ATGCCGTCGG TCTACATGGT CCACCCCAAG ATGGGCGTCA AGGATTTCCC GGGCTTTCTG
GCCAAGCTGC GCGCCCAGCC CGGCGCCTAC AGCGCGGGCG TGCCGGGCCT GGGCACGCTG
GGCCATCTGA TGGTGGCGTC CTTCAACGAG ACCATGAAGA CCCAGGTGCA GATCGTGCCC
TACCGCGGCA ACGGGCCGGC GCTCAACGAT GCGCTGGCCG GCATGGTGCA GGTGATGACC
GACCAGCTGC CTTCGGCCAT GCCCCAGATC AAGGGCGGCA AGCTGATCCC CGTGGCGCTG
TCGGGCGACA GCCGCTCGCC CGACCTGCCC GATGTGCCCA CCTTCAAGGA GCTGGGCTAC
GCGCAGCTCA ACGAACTGGG CATCAGCTGG TTCGGGCTGG TCGTGCCGGC CGGCACGCCA
CCGGCCATCG TCCGGCAGTT GCAGGATGCG TCGGTGAAGG CCGTGCGCCT GCCCGAGGTG
CAAAAGCACC TGAAGCTGCT GGGCGCCTCG GTCACCGAGA TGGACCAGAG CCGCTTCCCC
GCCCAGATCG CCAGCGAACT GCAGCGCAAC AAGGCGCTGC TGGACAAGGC AGGAGTGAAG
CCGGAATGA
 
Protein sequence
MQAKPLFQLP RRTVLSLGTS GLAAVLCGLT LAHTISTAHA ADAYPNKPVK LIVPFAAGGS 
TDIVARVIAE GLRSTLGQPV VVDNKAGAGG LIGTESIAQA APDGYTIGMA TVSTATINPS
LYTRAAKLEG RLLPVANLVT MPSVYMVHPK MGVKDFPGFL AKLRAQPGAY SAGVPGLGTL
GHLMVASFNE TMKTQVQIVP YRGNGPALND ALAGMVQVMT DQLPSAMPQI KGGKLIPVAL
SGDSRSPDLP DVPTFKELGY AQLNELGISW FGLVVPAGTP PAIVRQLQDA SVKAVRLPEV
QKHLKLLGAS VTEMDQSRFP AQIASELQRN KALLDKAGVK PE