| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2785 |
|---|
| Symbol | |
|---|
| ID | 5748361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3061900 |
|---|
| End bp | 3063246 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641297880 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_001563808 |
|---|
| Protein GI | 160898226 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2206] HD-GYP domain |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.471926 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.576348 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGAAT CATCGGCTTA CATATTGCCG ATTCCTTCAG CCTCGGGGCC GTTGCCGCGC
GTGAACCATT CCGTCCTCAT CGATATCCGA GACCTCCGTC CGGGCATGTT TGTCCAGCTC
GATGTTGGGT GGCTGAACCA TCCCTTTCCG GTCAGCAGCT TCAAGATCAC CTCCAGCGCA
CAGATCCAGA CCCTGAAATC CCTGGGCCTG GAGGCGGTGC GCTGTGTCCC GCACAAAAGC
GACACCTGGC CCGCCGAGGT GCGCACCCCG CCGCCGCAGG AGCTGCCGCC CGTCGTGGCG
GCCCCCGAGC CTGCACCCAC CGAACCTGCG CCAGCACCGC TGCTGCTGTC CGTGCCCGAC
TGGCGCGGCC GGCTGGAGGA CTGCAATGCG CGCTTTCAGA AGGTGGAGCG CGGCTATGTG
GCCATAGAGA CCACCATTGC CAGCGCGCCC GAGCAGGCGC GCATGCCCAC CGAGGCCCTG
GTCGATGGCT GCCTGGCCGA ACTGGCGGGC CCGCAGGACG TGGCCATTCA CCTGCTGTCC
GATGGCGTGG GCAGCAGCCA GAGCGTGCAT GCCGTCAACG TGACCGTGCT CAGCCTGCTG
CTGGGCCGGG CCCTGGGCCT GCAGGAATCG CTGCTGCGCG ACCTGGGCCT GGCGGCGCTG
CTGCATGACG CGGGCAAGCC CGTGGCCGGT GTCGAAGGCA TGCACGGCCT GGCCCTGGAG
CCTTCCGTGC CCGACGCCCT GCGCGAGCGC TACGAGCGCC ATGTGGGCGA ATCCGTGGCC
ATTGCCATGC GCATGGGCCT GTCGGCCCAG GTCACCACGG CCATCGCCCA GCACCATGAA
TGGGCCGACG GCACGGGGTT CCCGCTGAGC CTGGTGGCCG AGGACATGGA GCTCACGGGC
CAGATCCTGG CCCTGGTCAA CAGCTACGAC CGCCTGTGCA ATCCCGGCGA TGCACAGACG
CCGCATACGC CGCACGAGGC CCTGTCCATG CTGTTCAGCC GGCTGCGCGA CAAGTTCGCC
GCGCCCGTGC TCAATGGCTT CATCCGCATG ATGGGTGTGT TCCCCCCGGG CTCGGTGGTG
GAGCTGACCG ACGGGCGCCA TGCCATGGTC ATGTCCGTGA ATGCATCACG CCCGCTCAAG
CCCTCGGTGA TGGTGCACGA TGCCGGCGTG CCGGCCGCGC AGGCGCCTGT GCTGGCGCTG
GAGCTGTTTC CCGAGCTGGG CATACGCCGG GGAGTGGCGC CCGCGCAGCT GCCGCGCGAT
GCGCTGGACT ACCTGTCGCC GCGCCGGCGT GTCTGCTATT ACTTTGAACG GGCGGTGGAG
TTGGATCCAC CGAAGGTGGC GTCTTGA
|
|---|
| Protein sequence | MPESSAYILP IPSASGPLPR VNHSVLIDIR DLRPGMFVQL DVGWLNHPFP VSSFKITSSA
QIQTLKSLGL EAVRCVPHKS DTWPAEVRTP PPQELPPVVA APEPAPTEPA PAPLLLSVPD
WRGRLEDCNA RFQKVERGYV AIETTIASAP EQARMPTEAL VDGCLAELAG PQDVAIHLLS
DGVGSSQSVH AVNVTVLSLL LGRALGLQES LLRDLGLAAL LHDAGKPVAG VEGMHGLALE
PSVPDALRER YERHVGESVA IAMRMGLSAQ VTTAIAQHHE WADGTGFPLS LVAEDMELTG
QILALVNSYD RLCNPGDAQT PHTPHEALSM LFSRLRDKFA APVLNGFIRM MGVFPPGSVV
ELTDGRHAMV MSVNASRPLK PSVMVHDAGV PAAQAPVLAL ELFPELGIRR GVAPAQLPRD
ALDYLSPRRR VCYYFERAVE LDPPKVAS
|
|---|
| |