Gene Daci_2760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2760 
Symbol 
ID5748336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3035424 
End bp3036794 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content69% 
IMG OID641297855 
Productmajor facilitator transporter 
Protein accessionYP_001563783 
Protein GI160898201 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.937042 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC CTTACCCGCC GGGCCGCGTG TCCACGCCCA CGCCGGCCGA GTCGAACGGA 
CTCGGCTATG CCTACTACGT CACCATCATC CTGCTGCTGG CCTACACCCT GTCCTTCGTG
GACCGGCAGA TCCTGGGCCT GCTGGTGCAG CCCATCAAGA AGGATCTGCA GCTGTCGGAC
TGGGTGTTCA GCATCGTCCA CGGCTTTGCC TTCGCCATCT TCTACACCTT CGTCGGCATC
TTCCTGGGGC GCCTGGCCGA TCGCTGGAAC CGCCGCAACC TCATCGTCAT CGGCATGGCG
ATCTGGGTGG TGGCCACGGC GGCCGGCGGC TATGTCACGG GCTTTGTCTC GCTGTTCGTG
GCGCGCATGT TCGTGGGCGT GGGCGAGGCG GCGCTGTCGC CGGCGGCCTA TTCCATGCTG
GCCGACTACT TCCCGCCCGA GCGCCGCGCG CGCGCCATGA GCATCTACAC CTCGGGCGTG
TACATTGGCT CGGCCACGGC CTTCATCGTG GGCGGCCTGG TCATCCAGGC CACCAGCCAG
GCCGGCGAGG TGGTGTTCCC GCTGCTGGGC AGCTTCAAGC CCTGGCAGGC GGCCTTCATC
TTCGTGGCCC TGCCCGGCAT TGCGCTGGTG GCGCTGATGT ACACCGTGCG CGAGCCGGTG
CGCCGCGGCC TGCAGGCGGC AGGCGCCTCC GCCAGGGCCG CCGCTGCAGC AGGCCCCGCG
CCCGATCTGT CCCATGTGTT CCGCAACAAG CGCGCCTTCC TGCCGCTGCT GCTGGCGCCG
GGCATCACGG CCATGATCAC CTTCGGCGTC ACGGCCTGGC TGCCGGCTAC CTTCATCCGC
CAGTGGGGCT GGACGCCCGG CGAGATCGGT CCCGCCTACG GCGTCATCAT CCTGACCTTC
GGCATTGGCG GCATGCTGCT CAGCGGCTTC CTGGCCGACT ACCTCACGGC GCGCGGCAAG
CAGGTGGGGT CGATCGTCAT CTCGCTGGTG GCCACCGGCG TGCTCATCGC CAGCGGCCTG
GTGCTGGCCT TTGCGCCTTC GCCCACCGTG GCCCTGGTGG CCGTGGCGGT CACCACCTTT
TTCCTGGGCA TGCCGGTGGC GCTGGCACCG CCCATCCTGC AGGCGGTCAC GCCCAACCAG
CTGCGCGGCC AGGTGACTTC CATCTACCTG CTGCTGATCA ACCTGATCGG CCTGGGGCTT
GGTCCCTTCC TCGTGGCCTT CTTCACGGAC TTCGTCTTCC ATGACGAAAA GCTCGTGGGC
CTGTCGCTGG GCCTGGTGTC CGCCCTGGCC GCGCTGCTGT CCGTGCTGTG CCTGGCCAGC
GCCATCGGCC CCTACCGCCG CCTGGTCGCG GCCATGGAGG GCCGGGCATG A
 
Protein sequence
MSLPYPPGRV STPTPAESNG LGYAYYVTII LLLAYTLSFV DRQILGLLVQ PIKKDLQLSD 
WVFSIVHGFA FAIFYTFVGI FLGRLADRWN RRNLIVIGMA IWVVATAAGG YVTGFVSLFV
ARMFVGVGEA ALSPAAYSML ADYFPPERRA RAMSIYTSGV YIGSATAFIV GGLVIQATSQ
AGEVVFPLLG SFKPWQAAFI FVALPGIALV ALMYTVREPV RRGLQAAGAS ARAAAAAGPA
PDLSHVFRNK RAFLPLLLAP GITAMITFGV TAWLPATFIR QWGWTPGEIG PAYGVIILTF
GIGGMLLSGF LADYLTARGK QVGSIVISLV ATGVLIASGL VLAFAPSPTV ALVAVAVTTF
FLGMPVALAP PILQAVTPNQ LRGQVTSIYL LLINLIGLGL GPFLVAFFTD FVFHDEKLVG
LSLGLVSALA ALLSVLCLAS AIGPYRRLVA AMEGRA