Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2677 |
Symbol | |
ID | 5748253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2946783 |
End bp | 2947643 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641297772 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001563700 |
Protein GI | 160898118 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.519308 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAGCCT TTGATGCGAC GGCAAGGGCC GGAAGCATGA CTGCTGCTGC GAAGCTGCTT GATCTACAGC AGCCCACCAT CTCAGCGCAT ATTCAGCGCC TGGAGAATGA GTACGGCGTG GAGCTTTTTC TTCGTCAAGG CCGCCGGCTT GAGCTGACTA CCTTTGGCAG GACTCTGCTG GACTACACGC GGCGGGCATT CAGCGGCGAG GAAGATGCGC ACGCCCTTTT GGCAGCAGCC AAAAACCGAT TCGTCGGGCG TCTTGTGATT CACGCGATCG GCCCGTACAA CGTAGTCCCT GTTCTGAAGG CCTTCGGGAG CCGCCATCCC CAGGTCGAGG TCTCTGTCCG TGTAGGCGAC TCCCGCTCAA TCACGGAAAA GCTCCTCGAC TACCAGGGTG ATGTCGGCGT GGTCCTCAAT CACGCCGAGC ACCCCGAACT CCATTGCATG CCATACAGGT CACAGCGCCT GGTGGTCTTT GCGAACCGAG AGCACGCCCT AGCCCGGTGC GGTGAGATAG TGCTCAAGGA CCTTCAGAGC CAGCGCTTCG TCATACGTGA GGAAGGTTCA ACGACAAGAA GAGTCTTCGA GAGCGAGCTA ATTGCCCGCA ATATCAACAT CCAGGTTGCG CTGGAGATGG GAAGCCGGGA GGCTGTCCGC GAGGCAGTCG CACAAGGAAT AGGACTAGGC GTCGTTGCCG AGACAGCCTA TGTTCCAGAT CCGCGTCTTG TGAAGCTGAA GATTCTGGAT ACAGCAATGG CCACCCACGT CGACTTCATC TGTCGTCGCG AACGACAGAA CGCTCCGCTG ATAGCAACGA TTTTCGACTT GGCAAAAGAG GTGAGAAGAG GCCTGGCCTA A
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Protein sequence | MKAFDATARA GSMTAAAKLL DLQQPTISAH IQRLENEYGV ELFLRQGRRL ELTTFGRTLL DYTRRAFSGE EDAHALLAAA KNRFVGRLVI HAIGPYNVVP VLKAFGSRHP QVEVSVRVGD SRSITEKLLD YQGDVGVVLN HAEHPELHCM PYRSQRLVVF ANREHALARC GEIVLKDLQS QRFVIREEGS TTRRVFESEL IARNINIQVA LEMGSREAVR EAVAQGIGLG VVAETAYVPD PRLVKLKILD TAMATHVDFI CRRERQNAPL IATIFDLAKE VRRGLA
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