Gene Daci_2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2539 
Symbol 
ID5748108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2811607 
End bp2812056 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content58% 
IMG OID641297627 
Productpeptidase S24/S26 domain-containing protein 
Protein accessionYP_001563562 
Protein GI160897980 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.692907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCTG ACGAGGCGGC GATGCTTGCT CAGCTTCCCT GCGGAATTCG GCGATACCCG 
GTGCTTACTT CCAGCCAGGC CGTTGCCCGA AGTGAAGCCG TCGAGGGCTT GGAGAGTCTG
GGCACGGAAG TCTCTGCCAA CGAGGCATCA GTTCATGCTT TCTTCCTCCA GTTGGCTGGA
AACTCCATGA CTCCGGAGTT CCGTGAAGGA GACCGTGTAC TGATCGATCC AGGTGTCAAG
CCTCAGCCTG GAGACTACGT GGCCGCCCAG GTGGGAAAGA CCGAAGCCCT GTTTCGGAAA
TACCGGCTAC ACGGAAACGA TAGGCTGGGT AATGAGGTGT TTGAGCTGAT CCCGCTCAAT
CAAGACCATC CCGTCATGCG CAGTGACGAA CATGGGCTTT CCGTGATCGG AACCATGCTG
GAGTTGCGGC GGAAGTTTCC GCGCCCTTGA
 
Protein sequence
MTPDEAAMLA QLPCGIRRYP VLTSSQAVAR SEAVEGLESL GTEVSANEAS VHAFFLQLAG 
NSMTPEFREG DRVLIDPGVK PQPGDYVAAQ VGKTEALFRK YRLHGNDRLG NEVFELIPLN
QDHPVMRSDE HGLSVIGTML ELRRKFPRP