Gene Daci_2492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2492 
Symbol 
ID5748055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2753755 
End bp2754642 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content73% 
IMG OID641297574 
Productalpha/beta hydrolase fold 
Protein accessionYP_001563515 
Protein GI160897933 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.149577 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.991851 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAATA CGCCCGCCGC CATTGAGCGC CTGCGCGCCC AGGCGCGGCG CCTGACCACG 
CCGCTGTCTG CCGCGCAGCC CGAAGACGGC CACATGGTCT GGCATGTCTG GGGCGAGGTA
CGCGCGGGCG AGCTGCCCGT CGTCATGCTG CACGGCGGCA GCGGCAGCTG GACGCACTGG
CTGCGCTGCA TGGACGCGCT GCTGGCCCAG GGGCGCCAGC TGTGGATACC CGACCTGCCC
GGCTTCGGCG ATTCCGACGG CGTGCCGGGC GGCCAGGATG CCGACACCCT GGTCGAGCCG
CTGCGCCAGG GCCTGCGGCA ACTGCTGGCC GATGGCGGTG CGCCCGCCGC CCCGCTGTGT
GATCTGGTCG GCTTCTCTTT TGGCGGCATG ACGGCCGGCA TGTTGGCCGC CGCCGACGGC
ACGCTGGCCC GGCGCCTGGT GCTGGCCGGG GCGCCCGGCA TGGGCGTGGG CAAGGGCCTG
GCCGTGCGGC TCAAGGGCTG GCGCCACCTG GCCACGCCCG AGGCGCAGGC CGTGGCCCAC
CGCTACAACC TGCAGGCGCT GATGCTGCAT GACGCCAGCC TCATCGACGA GGACACGTTG
GCCCTGCATG TGCTCAACGT CGAGCGTGAC CGCCTTCCGC GCCGCCGCCT CTCGCACACC
GACGTGCTGG CGCGTGCCCT GCAGGCCGTG GACGGCCCCG TATGGGCCAT CTATGGCGAG
CACGACGCGC TCTACCCGGG CCCGATGATG CAGGAGCTGG CCCAGGCCTT TGCACGCCAT
GCGCGCGACT TCCGCGGCCT GGCGCTGGTG CCCGGCGCGG GCCACTGGGT CATGCATGAG
CGTCCCGATG CCTTTGTGGC GGCATTGACC GCTGCGCTGG ATTCCTGA
 
Protein sequence
MVNTPAAIER LRAQARRLTT PLSAAQPEDG HMVWHVWGEV RAGELPVVML HGGSGSWTHW 
LRCMDALLAQ GRQLWIPDLP GFGDSDGVPG GQDADTLVEP LRQGLRQLLA DGGAPAAPLC
DLVGFSFGGM TAGMLAAADG TLARRLVLAG APGMGVGKGL AVRLKGWRHL ATPEAQAVAH
RYNLQALMLH DASLIDEDTL ALHVLNVERD RLPRRRLSHT DVLARALQAV DGPVWAIYGE
HDALYPGPMM QELAQAFARH ARDFRGLALV PGAGHWVMHE RPDAFVAALT AALDS