Gene Daci_2375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2375 
Symbol 
ID5747938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2618819 
End bp2619625 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content68% 
IMG OID641297457 
Productnitrate ABC transporter, ATPase subunits C and D 
Protein accessionYP_001563398 
Protein GI160897816 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID[TIGR01184] nitrate transport ATP-binding subunits C and D 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCAT CGTCCAAGTT CATCGAGGTC CAGGGCGTGG AGCAGAGCTT CAAGACCGCC 
AAGGGCCTGT TTCCGGCGCT GCGCAATATC GACCTGACCA TTGCGCGGGG CGAGTTCGTC
TCGCTGATCG GCCACTCGGG CTGCGGCAAG TCCACCCTGC TGAACCTGAT CGCGGGCCTG
ACCACGCCCA CCACGGGCGT GCTGCTGTGC GCCAACAAGG AGATCAAGGG CCCCGGGCCC
GAGCGCGCCG TGGTCTTCCA GAACCACTCG CTGCTGCCCT GGCTGACCTG CGAGGGCAAC
ATCCACCTGG CCGTGGAGCG CGTCTATGGC CGCACGGAAA GCCGCGCCCA GCTCAAGGCA
CGCACCCTGG CCGCGCTGGA GCTGGTGGGC CTGGCCCATG CCGCGCACAA GCGGCCCGGC
GAAATCTCGG GCGGCATGAA GCAGCGCGTG GGCATTGCGC GCGCGCTGTC GATGGAGCCG
CAGGTGCTGC TGATGGACGA GCCCTTCGGC GCGCTCGATG CACTCACGCG CGCAAAGCTC
CAGGACGAGC TGCTGGAGAT CGTGGCGCGC ACGCAAAGCA CCGTGGTCAT GGTCACCCAC
GACGTGGACG AGGCCGTGCT GCTGTCCGAC AAGATCGTGA TGATGACCAA CGGCCCGGCA
GCCACCATCG GCGAGGTGCT GGAAGTCGGC ATCGCCCGGC CGCGCAACCG CGTGGCACTG
GCCGAGGACA ACCGCTACCG CGAGTGCCGC AAGGCGGTGA TCGACTTCCT GTACACGCGC
CAGGGGCATG TGGAAAAGGC GGCCTGA
 
Protein sequence
MNASSKFIEV QGVEQSFKTA KGLFPALRNI DLTIARGEFV SLIGHSGCGK STLLNLIAGL 
TTPTTGVLLC ANKEIKGPGP ERAVVFQNHS LLPWLTCEGN IHLAVERVYG RTESRAQLKA
RTLAALELVG LAHAAHKRPG EISGGMKQRV GIARALSMEP QVLLMDEPFG ALDALTRAKL
QDELLEIVAR TQSTVVMVTH DVDEAVLLSD KIVMMTNGPA ATIGEVLEVG IARPRNRVAL
AEDNRYRECR KAVIDFLYTR QGHVEKAA